New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 396730456 (1.140)4 (0.080) 4/254 NT 7.3% coding (1497/2001 nt) ydcP peptidase
?NC_002947 = 3967372 47 (0.990)coding (1565/2001 nt) ydcP peptidase

GCACCACCCTGTACCACGCCGACCGTATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTATGAAGCGCATGAAGAACACGGCGAA  >  NC_002947/3967225‑3967520
                                                                                                                                                      |                                                                                                                                                     
gCACCACCCTGTACCACGCCGACCGTATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAg                                                                                                                                                      <  4:37667‑M2/149‑2 (MQ=255)
     accCTGTACCACGCCGACCGTATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCga                                                                                                                                                 <  3:37667/149‑1 (MQ=255)
      cccTGTACCACGCCGACCGTATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCgag                                                                                                                                                <  6:206002/149‑1 (MQ=255)
           tACCACGCCGACCGTATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGCCTCCTCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCgag                                                                                                                                                <  1:249979/147‑1 (MQ=255)
           tACCACGCCGACCGTATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCAc                                                                                                                                           >  8:35690/1‑149 (MQ=255)
                              aaCTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTAcccc                                                                                                                        >  1:230075/1‑149 (MQ=255)
                                       ccccACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCa                                                                                                               <  5:264410/148‑1 (MQ=255)
                                       ccccACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCa                                                                                                               <  5:269149/148‑1 (MQ=255)
                                           acaGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGt                                                                                                          >  3:170764/1‑149 (MQ=255)
                                                cGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTc                                                                                                     <  7:35690/149‑1 (MQ=255)
                                                   aCTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGAc                                                                                                                                              <  6:180103/106‑1 (MQ=255)
                                                   aCTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGAc                                                                                                                                              >  5:180103/1‑106 (MQ=255)
                                                   aCTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTg                                                                                                  >  7:52908/1‑149 (MQ=255)
                                                    cTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTgg                                                                                                 <  3:247957/149‑1 (MQ=255)
                                                    cTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTg                                                                                                  <  2:230075/148‑1 (MQ=255)
                                                     ttCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGACGCCATCGAGGCACTGACTGAAGCACGCGTGCAGGCGCATCCGCCTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTAGCACCTGTCCTTCCTgga                                                                                                >  1:114035/1‑148 (MQ=255)
                                                      tCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGc                                                                                                >  6:82783/1‑148 (MQ=255)
                                                       cATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGc                                                                                                <  7:70951/147‑1 (MQ=255)
                                                         ttCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAAc                                                                                            >  1:239556/1‑149 (MQ=255)
                                                            ccAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGt                                                                                          <  4:100470/148‑1 (MQ=255)
                                                             cAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGta                                                                                         >  7:187528/1‑148 (MQ=255)
                                                                     aGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCa                                                                                 >  2:293139/1‑148 (MQ=255)
                                                                       cTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAggccttgagctgcgagttgggaatgaagtacgcctgtggggcatccagttcgatacggtcggcgtggtacag                                                                               <  2:68884‑M2/149‑73 (MQ=255)
                                                                       cTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATAc                                                                                      <  2:185002/141‑1 (MQ=255)
                                                                       cTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATAc                                                                                      >  1:185002/1‑141 (MQ=255)
                                                                       cTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAg                                                                                >  1:195291/1‑147 (MQ=255)
                                                                        tCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAggccttgagctgcgagttgggaatgaagtacgcctgtggggcatccagttcgatacggtcggcgtggtacagg                                                                              <  7:133080‑M2/149‑74 (MQ=255)
                                                                         cAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAgg                                                                            >  8:131929/1‑149 (MQ=255)
                                                                            ggCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGccc                                                                         <  2:269693/149‑1 (MQ=255)
                                                                            ggCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGccc                                                                         <  2:127591/149‑1 (MQ=255)
                                                                             gCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAggccttgagctgcgagttgggaatgaagtacgcctgtggggcatccagttcgatacggtcggcgtggtacagggtggt                                                                         >  1:68884‑M2/1‑71 (MQ=255)
                                                                             gCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCcg                                                                        <  4:170764/149‑1 (MQ=255)
                                                                             gCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCcg                                                                        >  8:79281/1‑149 (MQ=255)
                                                                                   c‑‑gccgcGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACtt                                                                  <  2:195291/149‑1 (MQ=255)
                                                                                       ccgcGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCt                                                                <  8:187528/149‑1 (MQ=255)
                                                                                         cgcgAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAggccttgagctgcgagttgggaatgaagtacgcctgtggggcatccagttcgatacggtcggcgtggtacagggtggtgcccagctg                                                                >  8:133080‑M2/1‑62 (MQ=255)
                                                                                         cgcgAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTa                                                               <  3:231034/149‑1 (MQ=255)
                                                                                          gcgAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTac                                                              <  5:82783/149‑1 (MQ=255)
                                                                                          gcaaaGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTac                                                              >  8:172061/4‑149 (MQ=255)
                                                                                                              actgCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCGCGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGc                                                                           <  8:44403/116‑1 (MQ=255)
                                                                                                              actgCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCGCGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGc                                                                           >  7:44403/1‑116 (MQ=255)
                                                                                                                   agcaCGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCAccgccg                                                                                                                                 >  4:95723/1‑58 (MQ=255)
                                                                                                                   agcaCGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCAccgccg                                                                                                                                 <  3:95723/58‑1 (MQ=255)
                                                                                                                   agcaCGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATc                                      >  2:239977/1‑148 (MQ=255)
                                                                                                                   agcaCGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACCTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATc                                      >  2:250294/1‑148 (MQ=255)
                                                                                                                       cgcgTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGc                                 <  1:239977/149‑1 (MQ=255)
                                                                                                                         cgTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCgg                               <  7:79281/149‑1 (MQ=255)
                                                                                                                             cAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCt                            <  7:131929/148‑1 (MQ=255)
                                                                                                                              aGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTAt                          <  4:102072/149‑1 (MQ=255)
                                                                                                                               ggCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTATg                         <  7:172061/149‑1 (MQ=255)
                                                                                                                                gcgcATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTATGa                        <  1:116590/149‑1 (MQ=255)
                                                                                                                                       cgcgTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTATGAAGCGCAt                 >  6:205740/1‑149 (MQ=255)
                                                                                                                                       cgcgTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTATGAAGCGCAt                 <  8:52908/149‑1 (MQ=255)
                                                                                                                                        gcgTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTATGAAGCGCAt                 >  1:67238/1‑149 (MQ=255)
                                                                                                                                          gTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGCCTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTAGGAAGCGCATg                >  7:233096/1‑147 (MQ=255)
                                                                                                                                             gcgggcgCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTATGAAGCGCATgaagaa           >  4:167803/1‑149 (MQ=255)
                                                                                                                                                 gcgcAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTATGAAGCGCATGAAGAACACg       <  2:67238/149‑1 (MQ=255)
                                                                                                                                                      aGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCTACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTATGAAGCGCATGAAGAACACGGCGaa  <  2:239556/149‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
GCACCACCCTGTACCACGCCGACCGTATCGAACTGGATGCCCCACAGGCGTACTTCATTCCCAACTCGCAGCTCAAGGCCCTGC‑‑GCCGCGAAGCCATCGAGGCACTGACTGCAGCACGCGTGCAGGCGCATCCGCGTGGCGGGCGCAAGGCCGAGACCACGCCACCGCCGGTGTACCCCGAGTCGCACCTGTCGTTCCTGGCCAACGTATACAACCAGAAGGCCCGCGACTTCTACCACCGCCACGGTGTGCAACTGATCGATGCGGCCTATGAAGCGCATGAAGAACACGGCGAA  >  NC_002947/3967225‑3967520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.