New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5649805 =54 (1.100)5 (0.110) 3/248 NT 9.0% coding (1388/2127 nt) PP_4959 diguanylate cyclase
?NC_002947 5649839 = 50 (1.080)coding (1354/2127 nt) PP_4959 diguanylate cyclase

CCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTGGCAATGC  >  NC_002947/5649692‑5649985
                                                                                                                                                   |                                                                                                                                                  
ccGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCAt                                                                                                                                                    >  5:228891/1‑148 (MQ=255)
  aaggcctgctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCaa                                                                                                                                                 >  7:95783‑M1/112‑149 (MQ=255)
        acaTCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATcgc                                                                                                                                             >  1:303376/1‑147 (MQ=255)
        acaTCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGa                                                                                                                                           <  3:19133/149‑1 (MQ=255)
         gctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATc                                                                                                                                                   <  8:26185‑M1/36‑1 (MQ=255)
         gctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATc                                                                                                                                                   <  8:21523‑M1/36‑1 (MQ=255)
         gctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATc                                                                                                                                                   >  7:26185‑M1/105‑140 (MQ=255)
         gctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATc                                                                                                                                                   >  7:21523‑M1/105‑140 (MQ=255)
                aaCGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGccc                                                                                                                                   >  3:240877/1‑149 (MQ=255)
                       gggTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGtt                                                                                                                            <  5:295288/149‑1 (MQ=255)
                         gTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATcgc                                                                                                                                             >  4:80533/1‑130 (MQ=255)
                         gTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATcgc                                                                                                                                             <  3:80533/130‑1 (MQ=255)
                         gTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGtt                                                                                                                            >  4:219318/1‑147 (MQ=255)
                         gTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGa                                                                                                                          <  1:7308/149‑1 (MQ=255)
                              gcCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTcc                                                                                                                     >  1:237781/1‑149 (MQ=255)
                               ccAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCt                                                                                                                    <  6:228891/149‑1 (MQ=255)
                                 aGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTgg                                                                                                                  <  5:233202/149‑1 (MQ=255)
                                  gcgcAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAg                                                                                                                         >  3:165524/1‑141 (MQ=255)
                                  gcgcAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAg                                                                                                                         <  4:165524/141‑1 (MQ=255)
                                      agcaAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTa                                                                                                             <  7:68690/149‑1 (MQ=255)
                                          aGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAg                                                                                                         <  1:123025/149‑1 (MQ=255)
                                             ccTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAg                                                                                                                                          <  6:188133/113‑1 (MQ=255)
                                             ccTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAg                                                                                                                                          >  5:188133/1‑113 (MQ=255)
                                                 gAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTa                                                                                                    <  2:303376/147‑1 (MQ=255)
                                                 gAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTAtt                                                                                                  >  6:124074/1‑149 (MQ=255)
                                                 gAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTAtt                                                                                                  >  2:54679/1‑149 (MQ=255)
                                                      cACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGa                                                                                             >  6:19413/1‑149 (MQ=255)
                                                      cACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGa                                                                                             >  8:244610/1‑149 (MQ=255)
                                                           aGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGccc                                                                                        >  2:83359/1‑149 (MQ=255)
                                                                  cATCGTGGAAGGTGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCgcttgc                                                                                 >  1:28761/1‑149 (MQ=255)
                                                                  cATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCgcttgc                                                                                 <  1:54679/149‑1 (MQ=255)
                                                                  cATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCgcttgc                                                                                 <  7:244610/149‑1 (MQ=255)
                                                                   aTCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCgcttgct                                                                                >  4:78697/1‑149 (MQ=255)
                                                                   aTCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAACTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCgcttgct                                                                                >  7:166105/1‑149 (MQ=255)
                                                                      gTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTgg                                                                             <  2:237781/149‑1 (MQ=255)
                                                                      gTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGCTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGcttgcttg                                                                              <  4:240877/148‑1 (MQ=255)
                                                                              cGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTAc                                                                     <  3:197463/149‑1 (MQ=255)
                                                                                  cTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGc                                                                         <  5:97464/141‑1 (MQ=255)
                                                                                  cTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGc                                                                         >  6:97464/1‑141 (MQ=255)
                                                                                     tgGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATtgctg                                                              <  3:219318/149‑1 (MQ=255)
                                                                                     tgGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATtgct                                                               <  3:123019/148‑1 (MQ=255)
                                                                                             acacCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGcc                                                      >  2:150716/1‑149 (MQ=255)
                                                                                                 cAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAAc                                                  <  2:28761/149‑1 (MQ=255)
                                                                                                 cAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAAc                                                  <  1:83359/149‑1 (MQ=255)
                                                                                                  aaGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCg                                                                                                       <  3:118011/95‑1 (MQ=255)
                                                                                                  aaGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCg                                                                                                       >  4:118011/1‑95 (MQ=255)
                                                                                                    ggTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgca                                               <  6:193307/149‑1 (MQ=255)
                                                                                                    ggTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgca                                               <  3:78697/149‑1 (MQ=255)
                                                                                                             ttgatgctcgaggacagcgtgcgcatggccatcgagcaTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCtt                                      >  7:95783‑M2/39‑149 (MQ=255)
                                                                                                             ctgctgCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACa                                                                    <  7:3489/119‑1 (MQ=255)
                                                                                                             ctgctgCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCtt                                      >  3:141132/1‑149 (MQ=255)
                                                                                                             ctgctgCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCAGCGTACa                                                                    >  8:3489/1‑119 (MQ=255)
                                                                                                               gatgctcgaggacagcgtgcgcatggccatcgagcaTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgcagc                                             <  8:21523‑M2/104‑1 (MQ=255)
                                                                                                               gatgctcgaggacagcgtgcgcatggccatcgagcaTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgcagc                                             >  7:21523‑M2/37‑140 (MQ=255)
                                                                                                               gatgctcgaggacagcgtgcgcatggccatcgagcaTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgcagc                                             >  7:26185‑M2/37‑140 (MQ=255)
                                                                                                               gatgctcgaggacagcgtgcgcatggccatcgagcaTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgcagc                                             <  8:26185‑M2/104‑1 (MQ=255)
                                                                                                                ctgctCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTACATCGGCCGAACGCAGCAGGCCTTCg                                    <  5:19413/148‑1 (MQ=255)
                                                                                                                ctgctCGATGGCCATGCGCACGCGGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTGCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTc                                     <  8:166105/147‑1 (MQ=255)
                                                                                                                 TGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGa                                   <  6:80648‑M1/148‑1 (MQ=255)
                                                                                                                        tGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTGgcg                           <  4:141132/149‑1 (MQ=255)
                                                                                                                           ccATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCg                                                         >  7:177023/1‑116 (MQ=255)
                                                                                                                           ccATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCg                                                         <  8:177023/116‑1 (MQ=255)
                                                                                                                                       tGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAg            >  8:268763/1‑149 (MQ=255)
                                                                                                                                                 caTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGc                                                       <  4:30962‑M2/94‑1 (MQ=255)
                                                                                                                                                 caTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGc                                                       >  3:30962‑M2/3‑96 (MQ=255)
                                                                                                                                                 caTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTGGCAATGc  <  6:200718‑M2/147‑1 (MQ=255)
                                                                                                                                                 caTCAATAGCGAGCGCGCCCGTCCGTTGAGTTCCTGCTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCTAAAGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTGGCAATGc  >  6:300064‑M2/3‑149 (MQ=255)
                                                                                                                                                  aTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTgg                             >  7:90701‑M2/2‑121 (MQ=255)
                                                                                                                                                  aTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTgg                             >  7:268687‑M2/2‑121 (MQ=255)
                                                                                                                                                  aTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTgg                             <  8:268687‑M2/120‑1 (MQ=255)
                                                                                                                                                  aTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTgg                             <  8:90701‑M2/120‑1 (MQ=255)
                                                                                                                                                   tCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGTTGCGTACATTGCTGCATCGGCAGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTgg        >  6:83342/1‑141 (MQ=255)
                                                                                                                                                   tCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGTTGCGTACATTGCTGCATCGGCAGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTgg        <  5:83342/141‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTGGCAATGC  >  NC_002947/5649692‑5649985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.