New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5649805 =	54 (1.100)	5 (0.110)	3/248	NT	9.0%	coding (1388/2127 nt)	PP_4959	diguanylate cyclase
	?	NC_002947	5649839 =	50 (1.080)					coding (1354/2127 nt)	PP_4959	diguanylate cyclase

CCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTGGCAATGC  >  NC_002947/5649692‑5649985                                                                                                                                                    |                                                                                                                                                   ccGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCAt                                                                                                                                                    >  5:228891/1‑148 (MQ=255)   aaggcctgctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCaa                                                                                                                                                 >  7:95783‑M1/112‑149 (MQ=255)         acaTCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATcgc                                                                                                                                             >  1:303376/1‑147 (MQ=255)         acaTCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGa                                                                                                                                           <  3:19133/149‑1 (MQ=255)          gctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATc                                                                                                                                                   <  8:26185‑M1/36‑1 (MQ=255)          gctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATc                                                                                                                                                   <  8:21523‑M1/36‑1 (MQ=255)          gctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATc                                                                                                                                                   >  7:26185‑M1/105‑140 (MQ=255)          gctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATc                                                                                                                                                   >  7:21523‑M1/105‑140 (MQ=255)                 aaCGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGccc                                                                                                                                   >  3:240877/1‑149 (MQ=255)                        gggTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGtt                                                                                                                            <  5:295288/149‑1 (MQ=255)                          gTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATcgc                                                                                                                                             >  4:80533/1‑130 (MQ=255)                          gTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATcgc                                                                                                                                             <  3:80533/130‑1 (MQ=255)                          gTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGtt                                                                                                                            >  4:219318/1‑147 (MQ=255)                          gTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGa                                                                                                                          <  1:7308/149‑1 (MQ=255)                               gcCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTcc                                                                                                                     >  1:237781/1‑149 (MQ=255)                                ccAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCt                                                                                                                    <  6:228891/149‑1 (MQ=255)                                  aGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTgg                                                                                                                  <  5:233202/149‑1 (MQ=255)                                   gcgcAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAg                                                                                                                         >  3:165524/1‑141 (MQ=255)                                   gcgcAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAg                                                                                                                         <  4:165524/141‑1 (MQ=255)                                       agcaAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTa                                                                                                             <  7:68690/149‑1 (MQ=255)                                           aGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAg                                                                                                         <  1:123025/149‑1 (MQ=255)                                              ccTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAg                                                                                                                                          <  6:188133/113‑1 (MQ=255)                                              ccTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAg                                                                                                                                          >  5:188133/1‑113 (MQ=255)                                                  gAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTa                                                                                                    <  2:303376/147‑1 (MQ=255)                                                  gAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTAtt                                                                                                  >  6:124074/1‑149 (MQ=255)                                                  gAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTAtt                                                                                                  >  2:54679/1‑149 (MQ=255)                                                       cACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGa                                                                                             >  6:19413/1‑149 (MQ=255)                                                       cACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGa                                                                                             >  8:244610/1‑149 (MQ=255)                                                            aGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGccc                                                                                        >  2:83359/1‑149 (MQ=255)                                                                   cATCGTGGAAGGTGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCgcttgc                                                                                 >  1:28761/1‑149 (MQ=255)                                                                   cATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCgcttgc                                                                                 <  1:54679/149‑1 (MQ=255)                                                                   cATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCgcttgc                                                                                 <  7:244610/149‑1 (MQ=255)                                                                    aTCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCgcttgct                                                                                >  4:78697/1‑149 (MQ=255)                                                                    aTCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAACTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCgcttgct                                                                                >  7:166105/1‑149 (MQ=255)                                                                       gTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTgg                                                                             <  2:237781/149‑1 (MQ=255)                                                                       gTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGCTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGcttgcttg                                                                              <  4:240877/148‑1 (MQ=255)                                                                               cGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTAc                                                                     <  3:197463/149‑1 (MQ=255)                                                                                   cTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGc                                                                         <  5:97464/141‑1 (MQ=255)                                                                                   cTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGc                                                                         >  6:97464/1‑141 (MQ=255)                                                                                      tgGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATtgctg                                                              <  3:219318/149‑1 (MQ=255)                                                                                      tgGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATtgct                                                               <  3:123019/148‑1 (MQ=255)                                                                                              acacCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGcc                                                      >  2:150716/1‑149 (MQ=255)                                                                                                  cAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAAc                                                  <  2:28761/149‑1 (MQ=255)                                                                                                  cAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAAc                                                  <  1:83359/149‑1 (MQ=255)                                                                                                   aaGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCg                                                                                                       <  3:118011/95‑1 (MQ=255)                                                                                                   aaGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCg                                                                                                       >  4:118011/1‑95 (MQ=255)                                                                                                     ggTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgca                                               <  6:193307/149‑1 (MQ=255)                                                                                                     ggTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgca                                               <  3:78697/149‑1 (MQ=255)                                                                                                              ttgatgctcgaggacagcgtgcgcatggccatcgagcaTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCtt                                      >  7:95783‑M2/39‑149 (MQ=255)                                                                                                              ctgctgCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACa                                                                    <  7:3489/119‑1 (MQ=255)                                                                                                              ctgctgCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCtt                                      >  3:141132/1‑149 (MQ=255)                                                                                                              ctgctgCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCAGCGTACa                                                                    >  8:3489/1‑119 (MQ=255)                                                                                                                gatgctcgaggacagcgtgcgcatggccatcgagcaTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgcagc                                             <  8:21523‑M2/104‑1 (MQ=255)                                                                                                                gatgctcgaggacagcgtgcgcatggccatcgagcaTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgcagc                                             >  7:21523‑M2/37‑140 (MQ=255)                                                                                                                gatgctcgaggacagcgtgcgcatggccatcgagcaTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgcagc                                             >  7:26185‑M2/37‑140 (MQ=255)                                                                                                                gatgctcgaggacagcgtgcgcatggccatcgagcaTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgcagc                                             <  8:26185‑M2/104‑1 (MQ=255)                                                                                                                 ctgctCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTACATCGGCCGAACGCAGCAGGCCTTCg                                    <  5:19413/148‑1 (MQ=255)                                                                                                                 ctgctCGATGGCCATGCGCACGCGGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTGCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTc                                     <  8:166105/147‑1 (MQ=255)                                                                                                                  TGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGa                                   <  6:80648‑M1/148‑1 (MQ=255)                                                                                                                         tGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTGgcg                           <  4:141132/149‑1 (MQ=255)                                                                                                                            ccATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCg                                                         >  7:177023/1‑116 (MQ=255)                                                                                                                            ccATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCg                                                         <  8:177023/116‑1 (MQ=255)                                                                                                                                        tGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAg            >  8:268763/1‑149 (MQ=255)                                                                                                                                                  caTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGc                                                       <  4:30962‑M2/94‑1 (MQ=255)                                                                                                                                                  caTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGc                                                       >  3:30962‑M2/3‑96 (MQ=255)                                                                                                                                                  caTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTGGCAATGc  <  6:200718‑M2/147‑1 (MQ=255)                                                                                                                                                  caTCAATAGCGAGCGCGCCCGTCCGTTGAGTTCCTGCTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCTAAAGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTGGCAATGc  >  6:300064‑M2/3‑149 (MQ=255)                                                                                                                                                   aTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTgg                             >  7:90701‑M2/2‑121 (MQ=255)                                                                                                                                                   aTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTgg                             >  7:268687‑M2/2‑121 (MQ=255)                                                                                                                                                   aTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTgg                             <  8:268687‑M2/120‑1 (MQ=255)                                                                                                                                                   aTCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTgg                             <  8:90701‑M2/120‑1 (MQ=255)                                                                                                                                                    tCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGTTGCGTACATTGCTGCATCGGCAGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTgg        >  6:83342/1‑141 (MQ=255)                                                                                                                                                    tCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGTTGCGTACATTGCTGCATCGGCAGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTgg        <  5:83342/141‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCACGCTGTCCTCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGACATTGGCGCCACAGTCCGGGTAGGTGGCAATGC  >  NC_002947/5649692‑5649985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.