New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5903769	47 (0.960)	7 (0.160)	6/242	NT	14.5%	intergenic (+25/+82)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5903831	39 (0.860)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease

GGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAGTAC  >  NC_002947/5903687‑5903977                                                                                                                                                 |                                                                                                                                                    ggCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGtgcc                                                                                                                                                 <  6:82147‑M2/149‑5 (MQ=255)   cTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCCCCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGtgcccg                                                                                                                                               <  8:140588‑M2/149‑7 (MQ=255)        ttGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGaaa                                                                                                                                          <  2:224478/149‑1 (MQ=255)        ttGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGaaa                                                                                                                                          <  7:12517/149‑1 (MQ=255)           gTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAgg                                                                                                                                        >  1:210733/1‑148 (MQ=255)           gTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAgg                                                                                                                                        <  2:210733/148‑1 (MQ=255)           gTCAGAAGTATCAGGGACTATCCACATGGGGATGGGGTATGGCTTTTATGCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACCGGGCTCACCACACCCCTTATGGCTGTGAGGTCCCTGTGGGAGCGGGCGGGCCCGCGAAAgg                                                                                                                                        <  4:295773/148‑1 (MQ=38)                     tCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCGCCCACCGGGCTCACCACCACCCTGAAGGCGGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGGCAgg                                                                                                                             >  2:76296/1‑149 (MQ=39)                     tCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCCCGGGCATGCCCGCTCCCCCAGGGCTCACCCCAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAgg                                                                                                                             >  2:30334/1‑149 (MQ=255)                         ggACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCCATCCCCCACCCCCACGGCTGACCACCACCCAGAACGGGGGGAGGTGCCTGTGGGGGCCGGCGTGCCCGCGCAAAGGCCCCGTGCGGCCGa                                                                                                                         >  2:271622/1‑149 (MQ=255)                         ggACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGa                                                                                                                         >  2:210367/1‑149 (MQ=255)                            cTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCGGTGGGAGCGGGCGTGCCCGCCCAAGGGCCACGTCAGGCCGACGc                                                                                                                      >  6:66480/1‑149 (MQ=255)                              aTCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTAGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCACCGAAAGGGCCAGGTCAGGCCGACGCAg                                                                                                                    >  5:168535/1‑149 (MQ=255)                               tCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTTTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGc                                                                                                                   >  1:36311/1‑149 (MQ=255)                                    aTTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCt                                                                                                              <  3:41828/149‑1 (MQ=255)                                        ggttggggtttgggtttgAATCGGTGCTGGAGCTTTAGCGGTCTTGCCCGCTCCCACAGGGGTCACCACAACCTTGATGGCTGTGTGGTCGCTGTGGTTGGGGGGGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTgcgc                                                                                                          <  6:168535/143‑1 (MQ=255)                                                  tGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTg                                                                                               <  7:232466/149‑1 (MQ=255)                                                    gCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGa                                                                                              <  5:66480/148‑1 (MQ=255)                                                      tttGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCt                                                                                           >  6:305068/1‑149 (MQ=255)                                                                      aGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGtt                                                                           <  1:30334/149‑1 (MQ=255)                                                                        ccTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTgg                                                                         <  1:271622/149‑1 (MQ=255)                                                                          TTCGCGGGCATGCCCGCTCCCACAGGGCTCCCCACAACCCTGAAGGCTGTGAGGTCCCTGGGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGCCGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCt                                                                       <  5:22637‑M1/149‑1 (MQ=255)                                                                                  CATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTgg                                                                         <  1:134553‑M1/139‑1 (MQ=255)                                                                                  CATGCCCGCCCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTgg                                                                         >  2:134553‑M1/1‑139 (MQ=255)                                                                                   ATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCAcc                                                               <  8:228619‑M1/148‑1 (MQ=255)                                                                                     gCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCctc                                                            >  2:80951/1‑149 (MQ=255)                                                                                       ccGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCAtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagg                                                           <  8:184457‑M2/149‑91 (MQ=255)                                                                                        cGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGTCCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTc                                                         <  1:210367/149‑1 (MQ=255)                                                                                         gCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAgg                                                                                                                             <  3:137881/81‑1 (MQ=255)                                                                                         gCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAgg                                                                                                                             >  4:137881/1‑81 (MQ=255)                                                                                            cccACAGGGCTCACCACAACCCTGAAGGCTGGGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCTCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGAt                                                      <  1:76296/149‑1 (MQ=255)                                                                                             ccACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattgg                                                     <  1:164710‑M2/149‑97 (MQ=255)                                                                                             ccACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATc                                                     <  7:279490/148‑1 (MQ=255)                                                                                             ccACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATc                                                     <  1:80951/148‑1 (MQ=255)                                                                                             ccACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCg                                                    >  7:198487/1‑149 (MQ=255)                                                                                             ccACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCg                                                    >  7:157551/1‑149 (MQ=255)                                                                                             ccACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCg                                                    >  1:69773/1‑149 (MQ=255)                                                                                             ccACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCg                                                    >  1:71375/1‑149 (MQ=255)                                                                                              cacaGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattggc                                                    >  2:164710‑M2/1‑52 (MQ=255)                                                                                              cacaGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGc                                                   <  7:228619/149‑1 (MQ=255)                                                                                              cacaGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCAtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattggc                                                    >  7:184457‑M2/1‑52 (MQ=255)                                                                                               acaGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGcc                                                  >  2:109409/1‑149 (MQ=255)                                                                                                caGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCct                                                 >  5:148893/1‑149 (MQ=255)                                                                                                 aGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCctg                                                <  6:148893/149‑1 (MQ=255)                                                                                                   ggCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattggcaacaa                                               <  3:183362‑M2/149‑103 (MQ=255)                                                                                                        accacAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAAt                                          <  1:109409/148‑1 (MQ=255)                                                                                                        acaacaACCCTTATGGCTGTGTGGTCGTTGTGGGTGGGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATc                                         <  6:22637/146‑1 (MQ=255)                                                                                                          cacaACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGc                                       <  3:174390/149‑1 (MQ=255)                                                                                                          cacaACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCAtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattggcaacaatgtaccg                                        <  2:173428‑M2/149‑110 (MQ=255)                                                                                                           acaACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGcc                                      <  2:36311/149‑1 (MQ=255)                                                                                                            caACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCt                                     <  7:140588/149‑1 (MQ=255)                                                                                                              aCCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTg                                   <  2:69773/149‑1 (MQ=255)                                                                                                               cccTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGc                                  >  2:127160/1‑149 (MQ=255)                                                                                                                         tgtgAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCtt                                    <  6:120605/137‑1 (MQ=255)                                                                                                                         tgtgAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCtt                                    >  5:120605/1‑137 (MQ=255)                                                                                                                                        ggAGCGGGCGtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattggcaacaatgtaccgggctacatgaaccacacactcttcctgcc           >  4:183362‑M2/1‑10 (MQ=255)                                                                                                                                        ggAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCt         <  8:157551/149‑1 (MQ=255)                                                                                                                                              ggCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAGTa   <  8:198487/149‑1 (MQ=255)                                                                                                                                               gCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAGTAc  >  6:206544/1‑149 (MQ=255)                                                                                                                                               gCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAGTAc  >  2:306017/1‑149 (MQ=255)                                                                                                                                                cGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGcg                                 <  8:82311/117‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                    GGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGC‑CGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAGTAC  >  NC_002947/5903687‑5903977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.