| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,278,469 | G→C | 7.5% | intergenic (+209/‑21) | PP_4652 → / → purP | membrane protein/adenine:H+ symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,278,469 | 0 | G | C | 7.5% | 233.1 / 6.3 | 79 | intergenic (+209/‑21) | PP_4652/purP | membrane protein/adenine:H+ symporter |
| Reads supporting (aligned to +/- strand): ref base G (40/33); new base C (2/4); total (42/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
GAAAAACCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCATCCTCGGCGAGAC > NC_002947/5278330‑5278617 | gAAAAACCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCtt > 2:222019/1‑149 (MQ=255) aaaaCCCATTCCCCACCGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTgg < 4:32110/149‑1 (MQ=255) ccATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTggg < 5:139/145‑1 (MQ=255) ccATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTggg > 6:139/1‑145 (MQ=255) ccATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGc > 5:79355/1‑149 (MQ=255) ttCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGTGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCggg < 7:122785/149‑1 (MQ=255) ttCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCggg > 5:119472/1‑149 (MQ=255) cccAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCAt > 1:187875/1‑149 (MQ=255) cccAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCAt > 2:7496/1‑149 (MQ=255) ccAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCTGGGGCGAGTTGGGGAGCGGGCagg > 6:215460/1‑147 (MQ=255) ccAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATg > 1:65122/1‑149 (MQ=255) cAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCg > 7:203037/1‑142 (MQ=255) cAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCg < 8:203037/142‑1 (MQ=255) aCGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCCCCGGCGCCATgaa < 5:10482/135‑3 (MQ=255) aCGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCCCCGGCGCCATgaa > 6:10482/1‑133 (MQ=255) cGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTgg < 1:222019/149‑1 (MQ=255) aTAGGCCCCCTCCATTCCTGCTGGTATTATGCGCGGCTTTGTTCCTCCCCACACAAAACCCCGTCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAgg < 8:256862/149‑1 (MQ=255) aTAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAgg < 5:102806/149‑1 (MQ=255) aTAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAgg < 6:79355/149‑1 (MQ=255) aTAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAgg > 6:102806/1‑149 (MQ=255) tAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCAAGGCGCCCCCGGCGCCATgaa < 2:251100/128‑3 (MQ=255) aGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCt > 5:91339/1‑149 (MQ=255) gCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGc > 1:45782/1‑137 (MQ=255) gCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGc < 2:45782/137‑1 (MQ=255) ccGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTc > 3:154830/1‑148 (MQ=255) ccGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTc < 4:154830/148‑1 (MQ=255) catgcatgCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCAAGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACt > 2:59571/1‑148 (MQ=255) catgcTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAagag < 8:85583/149‑1 (MQ=255) catgcTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAagag > 8:3642/1‑149 (MQ=255) tgcTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGca < 7:3642/149‑1 (MQ=255) cTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGcaca < 1:7496/149‑1 (MQ=255) cTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGcaca < 2:187875/149‑1 (MQ=255) gTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACacaa > 3:132320/1‑149 (MQ=255) gTATGATGCGCGGCTTTTTTCCTCCCCACAAAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGcacacat > 5:80075/1‑148 (MQ=255) tATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACacaac < 5:268314/149‑1 (MQ=255) gatgCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACacaa < 5:36905/145‑1 (MQ=255) gatgCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACacaa > 6:36905/1‑145 (MQ=255) gcgGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGt < 6:119472/149‑1 (MQ=255) ttttttCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCa > 2:159898/1‑149 (MQ=255) cctccCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCgag < 7:75079/148‑1 (MQ=255) ctccCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCCCCGGCGCCATgaa < 1:294030/85‑3 (MQ=255) ctccCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCCCCGGCGCCATgaa > 2:294030/1‑83 (MQ=255) cccACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATtct > 1:166600/1‑149 (MQ=255) ccACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATtctc > 7:286633/1‑149 (MQ=255) cacacaAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGcacac > 8:105537/1‑121 (MQ=255) cacacaAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGc < 8:187850/117‑1 (MQ=255) cacacaAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGc > 7:187850/1‑117 (MQ=255) cacacaAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTcg > 1:100932/1‑149 (MQ=255) cacacaAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTcg > 2:228604/1‑149 (MQ=255) acaAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGc < 8:69499/114‑1 (MQ=255) acaAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGc > 7:69499/1‑114 (MQ=255) aaCCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGt < 2:65122/149‑1 (MQ=255) ccACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTca < 5:215460/149‑1 (MQ=255) cACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTcac > 6:196247/1‑149 (MQ=255) cACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCC‑GGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTcac > 3:60835/1‑148 (MQ=255) gTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCC‑GGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATgg < 4:60835/149‑1 (MQ=255) tgCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTa < 2:166600/149‑1 (MQ=255) tgCTTTGCTGTTGGGGTCGATACATTCATGGCACCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCt > 5:31559/1‑148 (MQ=255) cTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTAc < 2:100932/148‑1 (MQ=255) tttGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACAt > 6:200494/1‑149 (MQ=255) tGCTGTTGGTGTCCATACATTCATCGCGCCGCGGGCGCCTTGGGGAGCGGGCATGCTGCAAAGGCTGTATCAACTAAGAGCACACAACACCATCCTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATc < 7:252194/148‑1 (MQ=255) tGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGt > 4:84566/1‑149 (MQ=255) gTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAgg > 1:68772/1‑60 (MQ=255) gTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAgg < 2:68772/60‑1 (MQ=255) ggggTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATc < 7:91412/141‑1 (MQ=255) ggggTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATc > 8:91412/1‑141 (MQ=255) ggggTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCGTCCTGGCCATGGCCTACATCCTGTTCGt > 5:180539/1‑149 (MQ=255) tCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAAc > 5:124838/1‑149 (MQ=255) gATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAAcc < 5:196247/148‑1 (MQ=255) tACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGa < 1:228604/149‑1 (MQ=255) aTTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACGCGa < 6:84547/146‑1 (MQ=255) aTTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGa > 5:84547/1‑146 (MQ=255) cATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCATcc > 8:104164/1‑149 (MQ=255) aTGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTc < 6:268420/132‑1 (MQ=255) aTGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTc > 5:268420/1‑132 (MQ=255) tGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCgg > 6:57430/1‑93 (MQ=255) tGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCgg < 5:57430/93‑1 (MQ=255) cgcCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCATCCTCGGc < 5:200494/149‑1 (MQ=255) gcCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCCACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCATCCTCGGc > 7:251663/1‑148 (MQ=255) ggggCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGACCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCATCCTCGGCGAGAc < 7:104164/149‑1 (MQ=255) | GAAAAACCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCATCCTCGGCGAGAC > NC_002947/5278330‑5278617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |