| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,295,092 | A→G | 5.6% | T192A (ACG→GCG) | PP_4668 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,295,092 | 0 | A | G | 5.6% | 212.4 / 2.1 | 71 | T192A (ACG→GCG) | PP_4668 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (39/28); new base G (2/2); total (41/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 | |||||||||||
AGCCTGTCCAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACGGCAGCGCTGCAGGG > NC_002947/5294945‑5295240 | aGCCTGTCCAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGAc > 2:39428/1‑149 (MQ=255)aGCCTGTCCAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGAc < 1:39428/149‑1 (MQ=255) ccTGTCCAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACg > 1:160613/1‑148 (MQ=255) ccTGTCCAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACg > 1:60160/1‑148 (MQ=255) gTCCAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATc > 1:133489/1‑149 (MQ=255) tCCAAGCGTGAGGCGGACATCGGCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGAt < 2:241634/147‑1 (MQ=255) cAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGTCACCTGGCGGATcggc < 2:301656/149‑4 (MQ=255) aaGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGc > 2:54763/1‑149 (MQ=255) aaGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGc > 7:28594/1‑149 (MQ=255) cATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTtca > 1:541/1‑149 (MQ=255) aTCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTtcat < 2:160613/149‑1 (MQ=255) gTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAg > 2:245232/1‑149 (MQ=255) cATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGTCACCTGGCGGATcgg > 2:234609/1‑125 (MQ=255) cATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGTCACCTGGCGGATcgg < 1:234609/127‑3 (MQ=255) aTCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGtt < 8:235753/148‑1 (MQ=255) tCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTAc > 3:224822/1‑149 (MQ=255) gCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTgg > 5:91257/1‑149 (MQ=255) ccGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCg > 1:3410/1‑149 (MQ=255) cGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGt < 4:261347/149‑1 (MQ=255) gAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGtt < 6:91257/149‑1 (MQ=255) gAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGtt < 1:245232/149‑1 (MQ=255) gcctGGGCCCTATCGGTGCGCCACGCTGTGCCACTCCCGCCTGCGGCTGTATGCCACCCCGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGtt < 4:224822/144‑1 (MQ=255) ggCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTc < 2:60160/148‑1 (MQ=255) gCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTcc > 2:283795/1‑148 (MQ=255) gCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTcc > 6:284427/1‑148 (MQ=255) aTGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAgc < 1:283795/147‑1 (MQ=255) tgtgCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCg < 8:33465/141‑1 (MQ=255) tgtgCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCg > 7:33465/1‑141 (MQ=255) tgtgCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGctgctg > 7:40508/1‑149 (MQ=255) gctgcAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTAc > 2:294897/1‑149 (MQ=255) ctgcAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGAc < 1:88369/121‑1 (MQ=255) ctgcAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGAc > 2:88369/1‑121 (MQ=255) ctgcAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTcc < 5:150684/136‑1 (MQ=255) ctgcAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTcc > 6:150684/1‑136 (MQ=255) gcAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTg > 6:52828/1‑149 (MQ=255) cAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACGCTGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCt < 1:54763/148‑1 (MQ=255) cAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTg < 8:40508/148‑1 (MQ=255) tgtgCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAAc > 1:72584/1‑149 (MQ=255) tgCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAAc < 5:284427/147‑1 (MQ=255) cGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGa > 1:299648/1‑149 (MQ=255) tACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATccc > 1:127844/1‑149 (MQ=255) cGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCaa < 1:294897/149‑1 (MQ=255) ccTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACg < 2:133489/149‑1 (MQ=255) tGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACAtt > 2:102934/1‑149 (MQ=255) gCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACAttt > 4:17382/1‑149 (MQ=255) cACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTgc > 1:106838/1‑149 (MQ=255) aCCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTgcg > 6:121851/1‑149 (MQ=255) cccAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTgcg > 1:176691/1‑148 (MQ=255) ccAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTgcg > 1:296245/1‑147 (MQ=255) ccTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCg < 2:296245/149‑1 (MQ=255) cTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGt > 1:114022/1‑149 (MQ=255) cTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGt < 2:114022/149‑1 (MQ=255) tGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGt > 5:62942/1‑148 (MQ=255) gACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGa < 1:102934/148‑1 (MQ=255) ccACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACAttt > 4:235158/1‑126 (MQ=255) ccACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACAttt < 3:235158/126‑1 (MQ=255) cACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCa > 3:201018/1‑149 (MQ=255) aCGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATcgcg > 6:230355/1‑146 (MQ=255) aCGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAg < 5:121851/149‑1 (MQ=255) aCGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAg > 3:288581/1‑149 (MQ=255) aCGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAg > 1:41855/1‑149 (MQ=255) gcCGATCGGGGAGGTGAAGGATCTGGAGAATCAGCCCTTGATCATTTTCG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTTGCTGGCCAACGTTATCGCGAACGCTTGCGCTCTTTTTCGCAGTAACAGCGTGATc < 4:283635/139‑1 (MQ=255) gcCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGATGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATc > 3:283635/1‑139 (MQ=255) ccGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTacac < 6:62942/149‑1 (MQ=255) agATCCGTCACCTGGCGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACg > 1:113802/2‑149 (MQ=255) tCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGTTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACgg > 5:261236/1‑147 (MQ=255) ggTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACGGCAGCGCTGc < 4:288581/149‑1 (MQ=255) gTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACGGCAGCGCTGCa < 5:230355/149‑1 (MQ=255) gTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACGGCAGCGCTGCa < 2:106838/149‑1 (MQ=255) tGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACGGCAGCGCTGCAg > 3:100511/1‑149 (MQ=255) gACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACGGCAGCGCTGCAgg > 5:275097/1‑149 (MQ=255) aCGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACGGCAGCGCTGCAggg < 5:52828/149‑1 (MQ=255) | AGCCTGTCCAAGCGTGAGGCGGACATCGTCATCGCGCTGGAGCGGCCCGAGCATGGGCCTTATGTGTGCTGCAAGCTGTGCGACTACCGCCTGCGGCTGTATGCCACCCAGGGCTACCTGGACAGCCACGCGCCGATCCGCCAGGTGACGGATCTGGCCAAACACCCCTTCATCAGTTACG‑TGGATGACCTGGCGTTCAGCTCCGAGCTGCTGTACCTGGCCAACCTGATCCCCAACGCTAGCGCACATTTGCGCAGTACCAGCGTGATCGCGCAGTACACGGCAGCGCTGCAGGG > NC_002947/5294945‑5295240 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |