Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,363,587 G→C 7.0% A60G (GCA→GGA)  glmM ← phosphoglucosamine mutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,363,5870GC 7.0% 180.2 / 3.3 57A60G (GCA→GGA) glmMphosphoglucosamine mutase
Reads supporting (aligned to +/- strand):  ref base G (25/28);  new base C (2/2);  total (27/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01

GCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTCGCCGACGCGGC  >  NC_002947/5363439‑5363728
                                                                                                                                                    |                                                                                                                                               
gCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTg                                                                                                                                                 >  2:12749/1‑149 (MQ=255)
   gTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCg                                                                                                                                               >  1:220432/1‑148 (MQ=255)
        cATCGTGCGGGTGTTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTc                                                                                                                                          <  4:43471/148‑1 (MQ=255)
         aTCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCg                                                                                                                                         >  1:241702/1‑148 (MQ=255)
          tCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGaa                                                                                                                                       <  3:904/149‑1 (MQ=255)
           cGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTc                                                                                                                                          >  7:288449/1‑145 (MQ=255)
           cGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTc                                                                                                                                          <  8:288449/145‑1 (MQ=255)
            gTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAAc                                                                                                                                      <  5:274860/148‑1 (MQ=255)
            gTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTCCGCACTCGaagc                                                                                                                                     <  1:261853/149‑3 (MQ=255)
             tGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACAt                                                                                                                                   <  2:80128/149‑1 (MQ=255)
                    tgtgCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCg                                                                                                                            <  5:288623/149‑1 (MQ=255)
                      tgCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGCGTGCGGACTCGAACATGTATCCg                                                                                                                            >  3:182325/1‑147 (MQ=255)
                      tgCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCgg                                                                                                                           <  1:289671/148‑1 (MQ=255)
                      tgCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCgg                                                                                                                           <  5:111945/148‑1 (MQ=255)
                        cGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTCCGCACTCGaagc                                                                                                                                     <  6:49748/137‑3 (MQ=255)
                        cGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTCCGCACTCGaagc                                                                                                                                     >  5:49748/1‑135 (MQ=255)
                         gAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGAt                                                                                                                      <  2:220432/149‑1 (MQ=255)
                               cTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCgt                                                                                                                <  6:77097/149‑1 (MQ=255)
                                  atgaCGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCgtg                                                                                                               <  2:241702/147‑1 (MQ=255)
                                  atgaCGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTc                                                                                                             <  5:269244/149‑1 (MQ=255)
                                          gCCGGCTTCGGCGTGGAAGGTATGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCcca                                                                                                     >  8:64713/1‑149 (MQ=255)
                                             ggCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCccacca                                                                                                  <  1:12749/149‑1 (MQ=255)
                                                   ggCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCAcgc                                                                                            >  5:254069/1‑149 (MQ=255)
                                                         ggaGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCTTGTCCTTGCCCACCAGCACGCGGCAAt                                                                                      <  2:167368/147‑1 (MQ=255)
                                                            ggTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGc                                                                                   <  6:254069/149‑1 (MQ=255)
                                                            ggTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGc                                                                                   >  4:80326/1‑149 (MQ=255)
                                                             gTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGt                                                                                                                                 >  1:185624/1‑103 (MQ=255)
                                                             gTACGCGTGAGGTAAGCGATGGACGGTGTCGGCATCTGCCATAGCAGCATCACATCGGCACCTGCAGCGGACAGGCCGGCTTCGAGTGCTGACTCGAACAttt                                                                                                                                 <  2:185624/103‑3 (MQ=255)
                                                               aCGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCctt                                                                                >  4:16872/1‑149 (MQ=255)
                                                                             cGATGGCCGGTGTCGGCATCGGCCCGAGTAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGc                                                                   >  8:134913/1‑148 (MQ=255)
                                                                             cGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGc                                                                   >  1:71454/1‑148 (MQ=255)
                                                                                    cGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATgccgg                                                           >  6:47618/1‑149 (MQ=255)
                                                                                    cGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATgccgg                                                           <  4:101518/149‑1 (MQ=255)
                                                                                           ggCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCa                                                    >  8:273708/1‑149 (MQ=255)
                                                                                            tcATCGGCCCGAGCAGCATCACATCGGCAACTGCCGCGGACAGGCCGTCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCAGCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAg                                                   <  4:182325/148‑1 (MQ=255)
                                                                                                  gCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGc                                             >  6:72597/1‑149 (MQ=255)
                                                                                                   cccGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCt                                            >  6:87685/1‑149 (MQ=255)
                                                                                                          agcaTCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCAt                                     >  6:268875/1‑149 (MQ=255)
                                                                                                               cacaTCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGt                                >  8:149388/1‑149 (MQ=255)
                                                                                                                acaTCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATTGTAGCCGGAGATACGCGTGTCCTTGCCCCCCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGt                                >  1:72330/1‑149 (MQ=255)
                                                                                                                  aTCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGAATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGt                                >  1:241978/1‑147 (MQ=255)
                                                                                                                  aTCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAg                             >  3:175110/1‑149 (MQ=255)
                                                                                                                     ggCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGc                           <  5:87685/148‑1 (MQ=255)
                                                                                                                     ggCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGc                           <  7:273708/148‑1 (MQ=255)
                                                                                                                     ggCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGc                           <  3:16872/148‑1 (MQ=255)
                                                                                                                      gCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGt                         >  2:292366/1‑149 (MQ=255)
                                                                                                                          cTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATc                     <  5:72597/149‑1 (MQ=255)
                                                                                                                           tGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCAcg                                                                                             >  7:185103/1‑76 (MQ=255)
                                                                                                                           tGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCAcg                                                                                             <  8:185103/76‑1 (MQ=255)
                                                                                                                            gCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCgg                   <  4:175110/149‑1 (MQ=255)
                                                                                                                            gCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGATTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCgg                   >  4:178266/1‑149 (MQ=255)
                                                                                                                             ccGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCgg                   <  5:47618/148‑1 (MQ=255)
                                                                                                                                  gACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTc             >  7:108588/1‑149 (MQ=255)
                                                                                                                                          atgttCGAGTCCGCACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTCGCCGAcgc     >  3:90167/4‑149 (MQ=255)
                                                                                                                                            cTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTCGCCGACGCgg   <  1:292366/149‑1 (MQ=255)
                                                                                                                                               cGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTCGCCGACGCGGc  <  7:149388/147‑1 (MQ=255)
                                                                                                                                                  gTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGccc                                                     <  4:259585/93‑1 (MQ=255)
                                                                                                                                                  gTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGccc                                                     >  3:259585/1‑93 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
GCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTCGCCGACGCGGC  >  NC_002947/5363439‑5363728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: