| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,566,413 | T→A | 10.4% | Q358L (CAG→CTG) | mutL ← | DNA mismatch repair protein MutL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,566,413 | 0 | T | A | 10.4% | 202.7 / 11.1 | 75 | Q358L (CAG→CTG) | mutL | DNA mismatch repair protein MutL |
| Reads supporting (aligned to +/- strand): ref base T (28/39); new base A (6/2); total (34/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.89e-01 | |||||||||||
CGGCAGCGGCTGCGAGGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCATGCTTG > NC_002947/5566265‑5566559 | cggcAGCGGCTGCGAGGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCct > 2:3508/1‑149 (MQ=255) gcAGCGGCTGCGAGGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCctgc < 5:178147/149‑1 (MQ=255) cAGCGGATGCGAGTGACGTGGGTGTTATTGATACTGGTAACCGGCTCCGCTGCCACCATTGGAAAACGACTGTTGCTGTGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCctgct < 5:58190/149‑1 (MQ=255) gCGAGGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑g > 2:71034/1‑149 (MQ=255) gCGAGGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑g < 7:212302/149‑1 (MQ=255) cGAGGGACGTGGTGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACCCACCGGCCAGCAGGCCGG‑T‑ga < 1:252496/149‑2 (MQ=255) aCGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGaa < 5:176119/149‑1 (MQ=255) gTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCctgc < 5:98930/131‑1 (MQ=255) gTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCctgc > 6:98930/1‑131 (MQ=255) gTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAAcc < 1:298815/149‑1 (MQ=255) ggTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCt < 1:299719/149‑1 (MQ=255) gtgtATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTc < 4:135970/149‑1 (MQ=255) gtgtATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTc < 6:247876/149‑1 (MQ=255) tATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAgg > 6:297611/1‑149 (MQ=255) tATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAg < 4:296186/148‑1 (MQ=255) tATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAg < 2:270132/148‑1 (MQ=255) atccTGGTAACCGGCGCCGCTGCCAGGATTGGGATACGACTGTTGCGGGGCGCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGTACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACgg < 3:191544/146‑1 (MQ=255) aTACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACgg < 5:297611/149‑1 (MQ=255) cTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGCT‑GGGGCGAACCAGCTCAGGTACGgca < 1:3508/149‑1 (MQ=255) ggTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGgcag > 6:244663/1‑147 (MQ=255) gTAACCGGCGCCGCTGCCCCCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCACGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGACCCAGCTCAGGTACGGcagaag > 4:219026/1‑149 (MQ=255) gTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGcagcag > 4:179191/1‑149 (MQ=255) gTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGcagcag > 4:93667/1‑149 (MQ=255) gTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGCCTCGAGGCTGTTCAAGCACCGGCGAGGCAAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑A‑GGGGCGAACCAGCTCAGGTACGGcagcag > 3:243036/1‑149 (MQ=255) gTAACCGGCGCCGCTGCCACCATTAGAAAACGACTGTTGCGGGTCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGT‑T‑GGGGCGAACCAGCTCAGGTACGgcagc < 3:142286/147‑1 (MQ=255) ccGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGc < 3:267115/149‑1 (MQ=255) cGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑TCGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGc < 1:40767/149‑1 (MQ=255) cGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCg > 1:88789/1‑149 (MQ=255) ggCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCgg < 2:132277/149‑1 (MQ=255) gcgcCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGc > 3:295500/1‑149 (MQ=255) cgcTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGc < 8:46999/149‑1 (MQ=255) tGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTgg > 8:187361/1‑149 (MQ=255) ccaccaTTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTgg < 8:289871/147‑1 (MQ=255) ccaccaTTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTc > 3:58772/1‑149 (MQ=255) caccaTTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑ggg < 1:128849/106‑1 (MQ=255) caccaTTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑ggg > 2:128849/1‑106 (MQ=255) ttGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCgg < 4:295500/149‑1 (MQ=255) aaaaCGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGt < 2:88789/149‑1 (MQ=255) cGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGcagcag > 6:49864/1‑119 (MQ=255) cGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGcagcag < 5:49864/119‑1 (MQ=255) cGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACAt < 5:244663/149‑1 (MQ=255) aCTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCg < 3:93667/149‑1 (MQ=255) cGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGTCCAGCTGGTCTTCCGGACGTACATCGGCCAAg < 6:67329/148‑1 (MQ=255) gTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGc < 1:136059/130‑1 (MQ=255) gTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGc > 2:136059/1‑130 (MQ=255) gTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTg > 4:2413/1‑149 (MQ=255) ttCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTg < 3:179191/148‑1 (MQ=255) aaGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCa < 5:95569/148‑1 (MQ=255) aGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCTGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATa < 1:71034/149‑1 (MQ=255) cACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATa > 4:46772/1‑147 (MQ=255) cGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAgg > 8:156135/1‑148 (MQ=255) ggCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGaa < 4:58772/149‑1 (MQ=255) gAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGt > 3:235861/1‑148 (MQ=255) ccAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGTCGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGc < 7:187361/149‑1 (MQ=255) ccAGGCGCATTTCACCCTGGGGCACGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGc > 7:135250/1‑149 (MQ=255) cAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCa > 3:199862/1‑149 (MQ=255) gcATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGt < 8:131428/124‑1 (MQ=255) gcATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGt > 7:131428/1‑124 (MQ=255) tCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGccc > 2:181985/1‑149 (MQ=255) cccTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATg < 3:287667/134‑1 (MQ=255) cccTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATg > 4:287667/1‑134 (MQ=255) ccTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTcg > 5:260659/1‑149 (MQ=255) aaCTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTcgcg > 5:8224/1‑140 (MQ=255) aaCTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTcgcg < 6:8224/140‑1 (MQ=255) ccccACCGGCCAGCAGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACt > 7:82988/4‑149 (MQ=255) cccACCGGCCAGCAGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACtt > 2:286067/3‑149 (MQ=255) cACCGGCCAGCAGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTcgcg > 6:156230/1‑136 (MQ=255) cACCGGCCAGCAGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTcgcg < 5:156230/136‑1 (MQ=255) cACCGGCCAGCAGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCa > 4:297663/1‑149 (MQ=255) cACCGGCCAGCAGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCa > 4:283655/1‑149 (MQ=255) aCCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTc > 1:141063/1‑114 (MQ=255) aCCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTc < 2:141063/114‑1 (MQ=255) aCCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTc < 3:2413/147‑1 (MQ=255) aCCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCa < 3:46772/148‑1 (MQ=255) aCCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCAt > 8:178138/1‑149 (MQ=255) aCCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCAt > 1:265693/1‑149 (MQ=255) ccGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCATg < 4:235861/149‑1 (MQ=255) ccGGCCAGCAGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCATg > 6:222494/1‑149 (MQ=255) ggCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCATGCt < 8:135250/149‑1 (MQ=255) ccTGCTGGCCGG‑G‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCATGCttg < 3:219026/149‑1 (MQ=255) | CGGCAGCGGCTGCGAGGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGG‑T‑GGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCATGCTTG > NC_002947/5566265‑5566559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |