| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,570,179 | C→A | 12.8% | A24S (GCA→TCA) ‡ | nnrD ← | ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,570,179 | 0 | C | A | 12.8% | 193.0 / 16.5 | 76 | A24S (GCA→TCA) ‡ | nnrD | ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (35/31); new base A (5/5); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.74e-01 | |||||||||||
TGCTCGGGCCGGGTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCCCATCCATGTCC > NC_002947/5570031‑5570319 | tGCTCGGGCCGGGTTGCCACTCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCtgccgtgc < 5:68025/149‑1 (MQ=255) gCCGGGTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGGCACGGCAgg < 2:271741/149‑1 (MQ=255) gggTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGGCACGGCAGGCgc < 7:121668/149‑2 (MQ=255) gggTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGGCACGGCAGGCgc < 5:97871/149‑2 (MQ=255) ccACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAAcc > 4:101519/1‑149 (MQ=255) ccACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGGCACGGCAGGc < 5:76002/141‑1 (MQ=255) ccACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCNTCCGGCACGNCAGGCgaganag > 6:76002/1‑142 (MQ=255) cACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGc > 8:112686/1‑144 (MQ=255) cACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGc < 7:112686/144‑1 (MQ=255) cACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCg > 6:38559/1‑149 (MQ=255) aCCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACgct > 7:102885/1‑149 (MQ=255) cAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACgctgc > 5:108056/1‑149 (MQ=255) cAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGACGCCTATGTGGGAATGCGCCTGCCGTTCCGGCAGGCGGGCAACCGACACgctgc > 8:54189/1‑149 (MQ=255) aGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACggggc > 1:109270/1‑144 (MQ=255) aGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACgctgct < 3:101519/149‑1 (MQ=255) gCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACgctgct > 2:136234/1‑148 (MQ=255) gccgcAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAAtt < 7:54189/149‑1 (MQ=255) aGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATtgt‑g > 5:61292/1‑142 (MQ=255) aGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATtgt‑g < 6:61292/142‑1 (MQ=255) ggcggcTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCgg > 1:119407/1‑105 (MQ=255) ggcggcTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCgg < 2:119407/105‑1 (MQ=255) gcggcTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACt > 7:263108/1‑149 (MQ=255) ttCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGgt > 7:144473/1‑149 (MQ=255) ggCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGtt < 2:243310/149‑1 (MQ=255) gCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGttt > 8:213847/1‑149 (MQ=255) gCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGttt > 1:159/1‑149 (MQ=255) gCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACAGGGGTGttt < 5:38559/149‑1 (MQ=255) cACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTg < 7:213847/149‑1 (MQ=255) cACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTg < 2:109270/149‑1 (MQ=255) cTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGt > 2:85045/1‑149 (MQ=255) aGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCt < 6:108056/148‑1 (MQ=255) aGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTg > 5:299533/1‑149 (MQ=255) cAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGCCCACCAGTACATGGCCAAAGTCGCCTTTGTCCCCATGCGCCTGCCGAGCCGTCAGCCGCGGAACCGTAACGCTGCGGCTCAATTGA‑GGAGCATTACTGGCGTGTTTGCTCTGCg > 2:268257/1‑149 (MQ=255) cAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCg < 2:159/149‑1 (MQ=255) aaCACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGctgctg > 1:261870/1‑111 (MQ=255) aaCACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGctgctg < 2:261870/111‑1 (MQ=255) cGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAg < 1:85045/149‑1 (MQ=255) ggTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCTTGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAgg < 2:295840/149‑1 (MQ=255) gTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGc < 6:299533/149‑1 (MQ=255) aCCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACgctgct > 4:142420/1‑93 (MQ=255) cccAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTc < 8:263108/148‑1 (MQ=255) ccAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCTTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAgg > 7:199046/1‑144 (MQ=255) ccAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAgg < 8:199046/144‑1 (MQ=255) ccAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAgg < 6:174973/144‑1 (MQ=255) ccAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAgg > 5:174973/1‑144 (MQ=255) ccAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTcc > 2:198859/1‑148 (MQ=255) gCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGGCTGCCGTGCCGGCACGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTg < 7:162424/149‑1 (MQ=255) ccccGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTgg > 6:56382/1‑148 (MQ=255) ccccGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGc < 2:118319/149‑1 (MQ=255) ccGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACgctgct > 6:275304/1‑80 (MQ=255) ccGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACgctgct < 5:275304/80‑1 (MQ=255) cGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCTTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAg > 6:156347/1‑148 (MQ=255) ccaccaGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAAtt < 4:235107/149‑1 (MQ=255) ccaccaGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAAtt < 5:56382/149‑1 (MQ=255) ccaGTACATGGCCAAAGTCGCCTTTGTGGTCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGTCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATtata < 5:156347/149‑1 (MQ=255) ccaGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATtata > 5:140105/1‑149 (MQ=255) caGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATAc < 4:119323/149‑1 (MQ=255) gCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAg > 8:141903/1‑149 (MQ=255) cAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAGCCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAAtt < 4:146295/134‑1 (MQ=255) cAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAGCCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAAtt > 3:146295/1‑134 (MQ=255) cAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGcc > 3:281268/1‑149 (MQ=255) cGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTAtt > 3:149829/1‑149 (MQ=255) gCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTAttg > 7:154997/1‑149 (MQ=255) gCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTAtt < 8:102885/148‑1 (MQ=255) gCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTAtt < 7:141903/148‑1 (MQ=255) gtgGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTAttgccttgc > 1:162822/1‑149 (MQ=255) gttgcccgcCTGCCGGCACGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGTGGGGGAATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTAttgccttgcc > 1:242122/7‑148 (MQ=255) gCATGCGCCTGCCGTGCCGGCAGGCGGGCAGCGGTCCCGCTGGTGAGAAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGAATGGGGTCAAAGTCTGCAATGTCTGGCAGACTTATACGCTCCTGAGCCCGTATTGCGTTGCccat > 5:58105/1‑149 (MQ=255) aTGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCccatcc < 8:154997/149‑1 (MQ=255) aTGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCccatcc < 1:136234/149‑1 (MQ=255) cccgcCTGCCGGCACGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCccatcca > 1:148690/3‑149 (MQ=255) ccgcCTGCCGGCACGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCccatccat > 3:269352/2‑149 (MQ=255) ccgcCTGCCGGCACGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCccatcc > 7:195532/2‑147 (MQ=255) ccgcCTGCCGGCACGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCccatcc < 8:195532/146‑1 (MQ=255) cgcCTGCCGTGCCGGCAGGCGGGCCACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAAGTATACGCACCTGAGCCCGTATTGCCTTGCCCATCCATg > 5:217268/1‑149 (MQ=255) gcCTGCCGTGCCGGCAGGCGGGCAACCGTCCCGCTGCTGAGCAATTGT‑GGGGCAGTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCCCATCCATGt > 5:311802/1‑149 (MQ=255) cTGCCGGGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCCCATCCATGTcc < 8:144473/149‑1 (MQ=255) | TGCTCGGGCCGGGTTGCCACGCTGACCAGCCCGGCGCCGCAACGCAGGGCGGCTTCGGCACTGAGCAACACAGCGCCTCCGGTACCCAGGTCGCCCCCGACCACCAGTACATGGCCAAAGTCGCCTTTGTGGGCATGCGCCTGCCGTGCCGGCAGGCGGGCAACCGTCACGCTGCTGAGCAATTGT‑GGGGCATTACTGGGGTGTTTGGTCTGCGGCATGGGGTCAAAGGCTCCAATGTCTGGCAGAATTATACGCACCTGAGCCCGTATTGCCTTGCCCATCCATGTCC > NC_002947/5570031‑5570319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |