| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,700,372 | A→G | 5.2% | I284V (ATT→GTT) ‡ | phaA → | poly(3‑hydroxyalkanoate) polymerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,700,372 | 0 | A | G | 5.2% | 231.1 / 2.1 | 76 | I284V (ATT→GTT) ‡ | phaA | poly(3‑hydroxyalkanoate) polymerase |
| Reads supporting (aligned to +/- strand): ref base A (34/38); new base G (2/2); total (36/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
CGGAAAAGAGCCTGGCGCGCTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGACCCTGCTGGTCAGCGTGCTGGACACCACCATGG > NC_002947/5700226‑5700516 | cGGAAAAGAGCCTGGCGCGCTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGAt > 1:61765/1‑148 (MQ=255) ggAAAAGAGCCTGGCGCGCTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTa < 4:251747/149‑1 (MQ=255) gAAAAGAGCCTGGCGCGCTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTAc > 2:295854/1‑149 (MQ=255) agagCCTGGCGCGCTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGgc < 7:253384/149‑1 (MQ=255) ccTGGCGCGCTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGgcagc > 7:15000/1‑148 (MQ=255) ccTGGCGCGCTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGCCGGTAATCGacagca < 4:294158/149‑1 (MQ=255) cTGGCGCGCTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCaa < 4:134965/149‑1 (MQ=255) gcgcgcTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGCCGGTAATCGacagcacc < 5:69471/147‑3 (MQ=255) cgcgcTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGAc < 1:103813/149‑1 (MQ=255) gcgcTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGAc > 1:179710/1‑148 (MQ=255) gcgcTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGAc < 2:179710/148‑1 (MQ=255) gcTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTg < 6:215682/149‑1 (MQ=255) ttCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGgca < 4:127856/136‑1 (MQ=255) ttCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGgca > 3:127856/1‑136 (MQ=255) ttCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGCCGGTAATCGacagcacc > 2:31269/1‑139 (MQ=255) cctgcGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCTCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACAt > 8:265739/1‑147 (MQ=255) cctgcGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATg < 1:264218/148‑1 (MQ=255) cctgcGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGc > 2:304723/1‑149 (MQ=255) cctgcGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGc > 2:151476/1‑149 (MQ=255) ctgcGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCt > 5:138055/1‑149 (MQ=255) ctgcGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCt < 3:33252/149‑1 (MQ=255) tgcGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTc > 5:138482/1‑149 (MQ=255) agACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCGCTCGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCgg < 1:238103/149‑1 (MQ=255) aCCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTgg < 1:304723/149‑1 (MQ=255) aCCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTgg > 5:215104/1‑149 (MQ=255) atcatcaGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCa < 8:15000/148‑1 (MQ=255) tcatcaGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAg > 4:9955/1‑110 (MQ=255) tcatcaGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAg < 3:9955/110‑1 (MQ=255) atcaGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTg > 2:78298/1‑149 (MQ=255) gCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACGTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTAcc > 5:261865/1‑149 (MQ=255) gcgcAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCAc > 4:228144/1‑149 (MQ=255) gcgcAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGCGGCATCACTTGTACCGCa < 2:61765/148‑1 (MQ=255) gcAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACtg > 2:308528/1‑149 (MQ=255) cAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGTAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACtgg < 8:211534/149‑1 (MQ=255) cccGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACtggtgg < 5:67468/149‑1 (MQ=255) cccGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACtggtgg > 5:104481/1‑149 (MQ=255) cGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGc > 4:275189/1‑149 (MQ=255) cccAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATgcc < 8:185300/149‑1 (MQ=255) ccAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCg > 4:235509/1‑110 (MQ=255) ccAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCg < 3:235509/110‑1 (MQ=255) ccAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATgccg > 5:15050/1‑149 (MQ=255) tGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTg < 1:78298/149‑1 (MQ=255) aaTGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTgg < 6:215104/148‑1 (MQ=255) aTGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGc > 6:47355/1‑148 (MQ=255) gCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGaa > 4:225127/1‑148 (MQ=255) gTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTg > 4:10510/1‑95 (MQ=255) gTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAgg > 1:58370/1‑149 (MQ=255) tCCACCTACATCGATGCTCTTAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAATGACCTGAACATGCTCGGCGCCTTCTCCGGTGGCATCACTTGTACCGCACTGGTGGGACACTATGCCGCCATTGGCGAGAACAAg < 7:146845/147‑1 (MQ=255) tCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAg < 6:104481/147‑1 (MQ=255) tCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGt > 4:238055/1‑149 (MQ=255) cACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCAc > 6:312024/1‑121 (MQ=255) cACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCAc < 5:312024/121‑1 (MQ=255) aCCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACATGAACATGCTCGGCGCCTGCTCCGTTGGCATACCTTGTACCGCAATGGTGGGCCACTATGCCGCCATGGGCGAGAACATGGTCaa > 4:208489/1‑149 (MQ=255) ccTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAAc < 8:188434/149‑1 (MQ=255) ccTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAAc < 3:275189/149‑1 (MQ=255) aCATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAgg < 2:57325/141‑1 (MQ=255) aCATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAgg > 1:57325/1‑141 (MQ=255) aCATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGcc > 5:233758/1‑149 (MQ=255) cATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGc < 7:265739/147‑1 (MQ=255) aTGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGAcc < 3:238055/149‑1 (MQ=255) gAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGACCCTGCTgg > 8:143336/1‑149 (MQ=255) aaaGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGACCctgctg < 1:308528/147‑1 (MQ=255) aaaGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGACCCTGCTgg < 3:228144/148‑1 (MQ=255) aagaagCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGACCctgc > 6:160064/1‑144 (MQ=255) aagaagCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGACCctgc < 5:160064/144‑1 (MQ=255) agaagCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTTCTCCGTTGGCATCACTTGTACCGCACTTGTGGGCCACTATGCCGCCATTGTCGAGAACAAGGTCAACGCCCTGACCCTGCTGGTCa < 6:15050/149‑1 (MQ=255) agCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGgcgc > 1:225108/1‑57 (MQ=255) agCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGgcgc < 2:225108/57‑1 (MQ=255) cGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCg < 6:17604/110‑1 (MQ=255) cGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCg > 5:17604/1‑110 (MQ=255) cGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGACCCTGCTGGTCAGCGTGc < 1:295854/149‑1 (MQ=255) ggTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGACCCTGCTGGTCAGCGTGCTGGAcacca < 5:47355/149‑1 (MQ=255) ttgctgcCGGTAATCGACAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCCCTATGCCGCCATTGGGGAGAACAAGGTCAACGACCTGACCCTGCTGGTCAGCGTGATGGCcaccac > 4:197661/2‑149 (MQ=255) tGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGACCCTGCTGGTCAGCGTGCTGGAcaccac > 7:292064/1‑148 (MQ=255) tGTCGATTACCGGCAGCAATGACCTGAACATGCGCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGTGCAACGCCCTGACCCTGCTGGTCAGCGTGCTGGACACCACCATg < 8:140952/149‑1 (MQ=255) tCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGACCCTGCTGGTCAGCGTGCTGGACACCACCATgg < 6:138482/148‑1 (MQ=255) aTTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGt > 1:232356/1‑101 (MQ=255) aTTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGt < 2:232356/101‑1 (MQ=255) | CGGAAAAGAGCCTGGCGCGCTTCTGCCTGCGCTCGCAGCAGCAGACCTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGTGAATGGGGCCTGTCCACCTACATCGATGCGCTGAAAGAAGCCGTCG‑ACGCGGTGCTGTCGATTACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCCGGTGGCATCACTTGTACCGCACTGGTGGGCCACTATGCCGCCATTGGCGAGAACAAGGTCAACGCCCTGACCCTGCTGGTCAGCGTGCTGGACACCACCATGG > NC_002947/5700226‑5700516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |