| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,030,348 | T→A | 5.8% | intergenic (+33/+34) | PP_5729 → / ← rpmG | hypothetical protein/50S ribosomal protein L33 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,030,348 | 0 | T | A | 5.8% | 210.4 / 2.7 | 69 | intergenic (+33/+34) | PP_5729/rpmG | hypothetical protein/50S ribosomal protein L33 |
| Reads supporting (aligned to +/- strand): ref base T (29/36); new base A (2/2); total (31/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.90e-01 | |||||||||||
CGGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCGGTGGTG > NC_002947/6030201‑6030487 | cGGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCtt > 4:154509/1‑148 (MQ=255) gCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGCCCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCg > 8:73842/1‑149 (MQ=255) ccGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCgg > 6:257724/1‑149 (MQ=255) ccGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGCATGCgg > 4:131541/1‑149 (MQ=255) gggTGGTCGGCCACAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGt > 4:186673/1‑149 (MQ=255) ggtggtCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGtt > 4:243669/1‑149 (MQ=255) tggtCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGtttt < 8:26386/149‑1 (MQ=255) gtCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGttttt < 8:230216/148‑1 (MQ=255) tCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCCAAAAAAAAA‑ACCCGCATCCGAAAGGAGGCGGGtttttt < 7:174994/149‑1 (MQ=38) gcGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGttttttt < 4:79949/148‑1 (MQ=255) ggCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCATCCGAAAGGAGGCGGGttttttttt < 2:292964/149‑3 (MQ=38) gCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAg < 6:219139/149‑1 (MQ=255) cAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCATCCGAAAGGAGGCGGGtttttttttggctg > 7:29925/1‑142 (MQ=38) aaCGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGc < 6:164519/149‑1 (MQ=255) gAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGa < 8:169640/149‑1 (MQ=255) aaTGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATc < 3:285053/149‑1 (MQ=255) tgCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTGAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCtta > 6:242315/1‑114 (MQ=255) cACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTAc > 6:222067/1‑149 (MQ=255) ccGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCgg > 2:16974/1‑119 (MQ=255) ccGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCgg < 1:16974/119‑1 (MQ=255) ccGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTa < 2:174165/145‑1 (MQ=255) ccGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTa > 1:174165/1‑145 (MQ=255) cgAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCA‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATc > 1:281389/1‑149 (MQ=255) aGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCtt < 7:164986/149‑1 (MQ=255) cgacgTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCt < 1:162164/149‑1 (MQ=255) gTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCt < 3:243669/149‑1 (MQ=255) tCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCtt < 4:250232/149‑1 (MQ=255) aGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTa < 3:265083/149‑1 (MQ=255) gcATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCtt > 5:109397/1‑143 (MQ=255) gcATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCtt < 6:109397/143‑1 (MQ=255) cAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTAAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTg > 1:167934/1‑149 (MQ=255) aaGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGc < 7:152315/149‑1 (MQ=255) aGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCg < 3:186673/149‑1 (MQ=255) ggCCGGTGCCGACCTGCTTATCCAGGGCTTCGACTTCAACTGAACCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATTCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGa < 5:39078/149‑1 (MQ=255) ggCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGa < 5:222067/149‑1 (MQ=255) gCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCg > 8:181481/1‑149 (MQ=255) ccGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAAGACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCg > 1:84304/1‑149 (MQ=255) ccGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑‑AAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAAcc < 4:221417/146‑1 (MQ=255) ccGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑‑AAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAAcc > 3:221417/1‑146 (MQ=255) cGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGa > 7:213000/1‑149 (MQ=255) gACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCAGCCTCCTTTAACATGCCGGTTTTTTTAATGTCGCCGATAAATTAAATAAAAATGGCTTCATTGTACACCACTTGATTGCGAACAACCAGa > 4:100968/1‑148 (MQ=255) aCCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGAt > 2:146715/1‑148 (MQ=255) ctgATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATAtt > 1:302228/1‑149 (MQ=255) aTCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCt < 8:213000/149‑1 (MQ=255) tCCAGTGCTTAGACTTCAACTGACCCTGCAACAGCA‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCtt < 2:167934/149‑1 (MQ=255) cAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTg < 5:257724/148‑1 (MQ=255) cAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTg < 3:131541/148‑1 (MQ=255) aGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCCCCTCGTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTAATTGATCTTGGCTTCCTTGTAACCCACGTGCTTGCGAACAACAGGATCATATTTGTTGa > 1:159670/1‑148 (MQ=255) aGGGCTTAGACTTAAACTGACCCTGAAACAGAC‑AAAAAAAA‑ACACGCCTCCATTCTGATGCCGGTATTTTTCAGGTCGCCGATCAATTACTTGATCTTTGCTTCCTAGTACACCCCGTGCTTCCTAAAAACCGGAACAAATATCTTGa > 4:59717/1‑148 (MQ=255) ttCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGa > 2:297407/1‑149 (MQ=255) ttCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCATTCTGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGa < 2:159670/149‑1 (MQ=255) aCTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGAtttt > 4:6928/1‑149 (MQ=255) aCTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGAtttt < 3:154509/149‑1 (MQ=255) cAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGt < 2:281389/147‑1 (MQ=255) aaCTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCg > 3:280289/1‑149 (MQ=255) cccTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGggtg < 2:302228/148‑1 (MQ=255) cTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGgtggtg > 6:255239/1‑149 (MQ=255) cAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTgc < 4:280289/147‑1 (MQ=255) aCAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTCGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCtt < 3:232895/149‑1 (MQ=255) gCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGtt < 7:73842/149‑1 (MQ=255) aaaaaaaa‑aCCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCggg < 7:2641/132‑1 (MQ=255) aaaaaaaa‑aCCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCggg > 8:2641/1‑132 (MQ=255) aaaaaaaa‑aCCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCtt < 3:6928/149‑1 (MQ=255) gaaaaaa‑aCCCGCATCCGAAAGGAGGCGGGATTTTTTCAGGTCGCCGATCAATTACTTGATCTTGCCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATGACGATTTTCTCCGGGGTGGTCCGCTTGTTCTTg > 6:93248/2‑149 (MQ=255) aaaaa‑aCCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTc > 7:283282/1‑149 (MQ=255) aaaa‑aCCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCg > 5:173136/1‑149 (MQ=255) aa‑aCCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATc < 6:80689/98‑1 (MQ=255) aa‑aCCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATc > 5:80689/1‑98 (MQ=255) ccctgctcgtTTCGGTTGCGGGTTTTTTTCTGGTCGCCGATCAATTAGTTGATCTTGGCTTCCTTGTACACCACGTGCTTGGGAACAAGCGGTTCATATTTCTTGTTCTCGTTTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCggtggt < 3:59717/144‑1 (MQ=255) cccGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCggtggt < 1:297407/149‑1 (MQ=255) cctcctTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCGgtggtg > 3:192424/1‑146 (MQ=255) | CGGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCACCCGCGAGTACGACGTCGAGCGCATCCAGATCAAGGCCGGTGCCGACCTGCTGATCCAGGGCTTCGACTTCAACTGACCCTGCAACAGCC‑AAAAAAAA‑ACCCGCCTCCTTTCGGATGCGGGTTTTTTTCAGGTCGCCGATCAATTACTTGATCTTGGCTTCCTTGTACACCACGTGCTTGCGAACAACCGGATCATATTTCTTGATCTCGATTTTGTCCGGGGTGGTGCGCTTGTTCTTGTCGGTGGTG > NC_002947/6030201‑6030487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |