| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 546,008 | A→T | 7.7% | intergenic (+48/‑25) | rpoC → / → PP_mr08 | DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 546,008 | 0 | A | T | 7.7% | 220.6 / 5.5 | 75 | intergenic (+48/‑25) | rpoC/PP_mr08 | DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA |
| Reads supporting (aligned to +/- strand): ref base A (37/32); new base T (4/2); total (41/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGAGCGCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGT > NC_002947/545861‑546145 | cgagcgCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGa > 2:98869/1‑148 (MQ=255)cgagcgCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGa > 4:79607/1‑148 (MQ=255) gcAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGtt > 4:274818/1‑149 (MQ=255) aaGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGc < 7:179373/149‑1 (MQ=255) aGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGcc < 4:115745/149‑1 (MQ=255) aGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGcc < 1:230004/149‑1 (MQ=255) gCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGAGCGATCATCGGCGACATGAAATGTTGcc > 6:199659/1‑148 (MQ=255) gTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCgat > 6:296621/1‑149 (MQ=255) gTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCga < 2:231245/148‑1 (MQ=255) gTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAACTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCga > 1:231245/1‑148 (MQ=255) gCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCCCTCCCCGCCCGATCATCGGCAACATTTCATGTCGCCgatga < 1:236522/148‑1 (MQ=25) ccGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATc > 1:217534/1‑149 (MQ=255) ccGCGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATc < 2:130295/149‑1 (MQ=255) agCCGACAAACCGCTTCGTGTAATCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATcgggcg < 8:257431/147‑1 (MQ=255) ccGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCGGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCgggg < 7:231267/149‑1 (MQ=255) aCCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCgat > 2:125315/1‑130 (MQ=255) aCCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCgat < 1:125315/130‑1 (MQ=255) cGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCggg < 5:14291/149‑1 (MQ=255) cTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGc > 5:294641/1‑149 (MQ=255) tGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCga > 1:126100/1‑108 (MQ=255) tGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCga < 2:126100/108‑1 (MQ=255) agAAGTGGAAGCTGCACTCACCGAAGCGCTGAATACCAGCGGAAATTTAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGTCGAAAAGAAATCTTGCCGATGCTCGGTCGGGGAGGGCCGGGGCCTCGTATTGACTGGGTg > 6:269369/2‑149 (MQ=255) aGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGc > 6:157845/1‑147 (MQ=255) gTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGc > 5:33838/1‑146 (MQ=255) gTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGAACATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGc > 5:29364/1‑146 (MQ=255) tGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTTAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGc > 1:30935/1‑145 (MQ=255) ggAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGc > 4:96531/1‑144 (MQ=255) gAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATc < 2:203717/149‑1 (MQ=255) gAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGCGCCTCGTCTTGACTGGGTGCAAGAt > 7:16119/1‑148 (MQ=255) aaGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCGCGGGAAGGCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATc < 7:51204/148‑1 (MQ=255) cTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCctct < 5:296621/149‑1 (MQ=255) cTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCctct > 5:148530/1‑149 (MQ=255) tGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATc > 2:228024/1‑144 (MQ=255) tGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATc < 1:228024/144‑1 (MQ=255) cACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCtt < 7:237043/126‑1 (MQ=255) cACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCtt > 8:237043/1‑126 (MQ=255) cTGACCGAAGCGCTTAATTCCAGAGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGa < 8:77337/149‑1 (MQ=255) aCCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCt > 1:58298/1‑116 (MQ=255) ttaccgcTGGAATTCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTg > 1:260937/5‑149 (MQ=255) aaGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTg > 8:28887/1‑148 (MQ=255) gcTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGTAATGTTGCCGATGATCGGGCGGGGAGGGCCGTGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTAccc > 7:281889/1‑149 (MQ=255) gcTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGTAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGCATGGGTGCAAGATCCTCTTTAGACTTTTGTAccc > 7:285831/1‑149 (MQ=255) tGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCt > 1:248161/1‑148 (MQ=255) aTTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTaaa < 3:274818/149‑1 (MQ=255) aGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGTGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTgg > 6:279009/1‑149 (MQ=255) aGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTgg < 3:79607/149‑1 (MQ=255) ggTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGa < 5:157845/149‑1 (MQ=255) tAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATc < 6:102988/114‑1 (MQ=255) tAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATc > 5:102988/1‑114 (MQ=255) aaattaattACTGGGCTA‑GCCCCGGGCACGCCTGGGGCTATCATCGGCTACATGTAATTTTGCCGATTATGGGGCGGGTAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGa < 5:199659/146‑1 (MQ=255) aaTTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGc > 6:71445/1‑149 (MQ=255) ttAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCgat < 4:1494/64‑1 (MQ=255) ttAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAAt < 4:157411/137‑1 (MQ=255) ttAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAAt > 3:157411/1‑137 (MQ=255) aaGTACATGGCAA‑GGCCCCGGCAAGCCTCGGGCTATCATCGGCTAAATGAAATGTTGCCTATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTcc < 6:33838/148‑1 (MQ=255) aaGTACAGGGCTA‑GGCCCGGCCTAGCGTCGGGCGATCTTCGGCGACATGAAATGTTGCTGATGTTCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTcc < 6:29364/148‑1 (MQ=255) cAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCg > 7:253734/1‑149 (MQ=255) cAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCg > 3:292778/1‑149 (MQ=255) cAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCATCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCg > 7:192108/1‑149 (MQ=255) ggCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGcc > 6:82004/1‑148 (MQ=255) ggCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGAGCGGGCGGGGAGGGCCGGGGCCGCGTCTTGACTGGGTGCACGATCCTCTGTAGACTTTTGTACCCGTAAATTTGGGGAGGCTCCGTCTCGcc > 1:247103/1‑148 (MQ=255) gCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCaa < 3:106317/149‑1 (MQ=255) gCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTACACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAAttttt > 8:105042/1‑149 (MQ=255) ccccGGCAAGCCTCGGGCGATCATCGGCGACGTGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTaa < 4:152265/118‑1 (MQ=255) ccccGGCAAGCCTCGGGCGATCATCGGCGACGTGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTaa > 3:152265/1‑118 (MQ=255) ccccGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTg < 3:96531/149‑1 (MQ=255) gggCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTATTGCCTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTATTGGCTTTCTTGCAAgc > 6:301216/1‑148 (MQ=255) cGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACaa < 6:294641/149‑1 (MQ=255) tttcatcGGCTTCATGAATTTTTGGCGATGATCGGGCGGGGATGTCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAATACAAt < 8:16119/147‑1 (MQ=255) gATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAg < 6:100670/73‑1 (MQ=255) gATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAg > 5:100670/1‑73 (MQ=255) gATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTc > 1:73579/1‑137 (MQ=255) gATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTc < 2:73579/137‑1 (MQ=255) tcatcGGCAACATTTCATGTCGCCGATGATCGCCCGAGGCTTGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACaa > 8:35861/1‑146 (MQ=25) tcGGCAACATTTCATGTCGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGt > 7:219529/1‑149 (MQ=255) aTGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGa > 6:152745/1‑96 (MQ=255) aTGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGa < 5:152745/96‑1 (MQ=255) | CGAGCGCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAA‑GGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGT > NC_002947/545861‑546145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |