| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,980 | A→G | 8.0% | intergenic (‑599/+32) | trmF ← / ← trmE | tRNA uridine 5‑carboxymethylaminomethyl modification protein/GTPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,980 | 0 | A | G | 8.0% | 210.5 / 6.9 | 75 | intergenic (‑599/+32) | trmF/trmE | tRNA uridine 5‑carboxymethylaminomethyl modification protein/GTPase |
| Reads supporting (aligned to +/- strand): ref base A (33/35); new base G (4/2); total (37/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.99e-01 | |||||||||||
CCGCGAAAGGATGGGTACATCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGCCAG > NC_002947/4838‑5122 | ccGCGAAAGGATGGGTACATCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAgcg > 6:175634/1‑149 (MQ=255) cgcgAAAGGATGGGTACATCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCTTAGGGAgcgg < 2:77581/149‑1 (MQ=255) gAAAGGATGGGTACATCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGgcgc < 8:97045/149‑1 (MQ=255) gAAAGGATGGGTACATCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGgcgc < 5:175634/149‑1 (MQ=255) aGGATGGTAACATCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGGGCTTGGTTCAGCTGGCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTg < 8:179687/149‑1 (MQ=255) aGGATGGGTACATCCACAGATATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTg < 6:4195/149‑1 (MQ=255) aGGATGGGTACATCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTg < 4:265908/149‑1 (MQ=255) gATGGGTACATCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGc < 8:7967/149‑1 (MQ=255) cATCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTg < 8:195864/149‑1 (MQ=255) cATCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCACTCCCTAAGGAGCGGCGCTTGGCCTTGCGt < 6:72938/148‑1 (MQ=255) tCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTgg < 5:25512/148‑1 (MQ=255) tCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTgg > 6:25512/1‑148 (MQ=255) tCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGc < 4:260716/149‑1 (MQ=255) ccACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGCGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATACATCTTCAGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCATAAGGAGCGGCGCTTGGACTTGAGTGGCt > 2:102463/1‑149 (MQ=255) agagATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAGGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCtgtg > 1:141898/1‑148 (MQ=255) cTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACt > 6:185695/1‑149 (MQ=255) ggTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTg > 7:234281/1‑149 (MQ=255) gTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGc < 8:96561/149‑1 (MQ=255) gTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGc < 4:10442/149‑1 (MQ=255) tGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATg > 7:32700/1‑149 (MQ=255) tAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGc < 5:76745/148‑1 (MQ=255) agagCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGa < 5:185695/149‑1 (MQ=255) gagCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCAACTTCAGCAACGAAATTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGaa > 3:227118/1‑149 (MQ=255) catcaCGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTgg < 4:85976/148‑1 (MQ=255) catcaCGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTg > 4:122484/1‑147 (MQ=255) atcaCGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGga < 5:155548/148‑1 (MQ=255) gTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATcc > 2:266952/1‑149 (MQ=255) cctcccGCTCCCAGAGGTGCTGGGGTCAGCGGGCTGCTTTGATCTTCTGCAACGATTTTCAGGC‑TAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCTGAAGCTGGAGAAAATCCGc < 4:227118/146‑1 (MQ=255) cACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGcc < 8:234281/149‑1 (MQ=255) cccGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGaaa > 6:251976/1‑140 (MQ=255) cccGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGaaa < 5:251976/140‑1 (MQ=255) ccACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGCAAAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAgg < 2:46168/149‑1 (MQ=255) ccACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGt > 1:96696/1‑149 (MQ=255) cacaGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGt > 7:56655/1‑148 (MQ=255) acaGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCa > 3:11260/1‑149 (MQ=255) ggTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATcc < 2:96696/149‑1 (MQ=255) gTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATcc > 8:249472/1‑148 (MQ=255) cTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGc < 7:249472/149‑1 (MQ=255) tGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCt > 6:281750/1‑148 (MQ=255) gggTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTg > 5:114347/1‑148 (MQ=255) gTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAAt < 8:32700/149‑1 (MQ=255) tCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATg < 1:266952/149‑1 (MQ=255) cGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTcc > 3:9528/1‑149 (MQ=255) ccTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGCGCTGAATGCTCCtgt > 4:190636/1‑149 (MQ=255) tcttctGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTcccc > 7:223748/1‑148 (MQ=255) tcttctGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTcccc > 5:248812/1‑148 (MQ=255) tcttctGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTAGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTcccc > 1:235366/1‑148 (MQ=255) tcttctGCAACAAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTccccc > 2:268880/1‑149 (MQ=255) ctGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTc > 5:72438/1‑131 (MQ=255) ctGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTc < 6:72438/131‑1 (MQ=255) tttCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGc > 3:252711/1‑149 (MQ=255) aGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTgg > 7:59007/1‑149 (MQ=255) aGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTg < 4:9528/148‑1 (MQ=255) aGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTg < 5:281750/148‑1 (MQ=255) gC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCg > 6:235473/1‑149 (MQ=255) gC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCg > 1:44026/1‑149 (MQ=255) gC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCg < 1:268880/149‑1 (MQ=255) aaaaaaaaGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGt > 3:299114/1‑148 (MQ=255) aaaaaaaaGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGt > 1:236831/1‑148 (MQ=255) aaaaaaaaGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGt > 5:21540/1‑148 (MQ=255) aaaaaaaGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTaa < 3:122484/149‑1 (MQ=255) aaaaaaGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAg > 7:47960/1‑149 (MQ=255) acaGCCGCTCCTTACGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTcc < 2:236831/147‑1 (MQ=255) aaaGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTcc < 6:9381/149‑1 (MQ=255) aaaGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGAGTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTcc < 6:1157/149‑1 (MQ=255) ccGCTCCTTAGGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAg > 8:282706/1‑149 (MQ=255) ccGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAg < 8:59007/149‑1 (MQ=255) cGCTCCTTAGGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTcccc < 8:224411/116‑1 (MQ=255) cGCTCCTTAGGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTcccc > 7:224411/1‑116 (MQ=255) cGCTCCTTAGGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGc > 4:173070/1‑149 (MQ=255) cGCTCCTTAGGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGc > 6:285228/1‑149 (MQ=255) cGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGc < 2:44026/149‑1 (MQ=255) gCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGcc < 8:47960/149‑1 (MQ=255) cTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGCCa < 8:56655/149‑1 (MQ=255) ccTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGCCAg > 1:53795/1‑147 (MQ=255) | CCGCGAAAGGATGGGTACATCCACAGAGATCTGGTGCTTGTAAGAGCTTCATCACGGGTCCACCCGCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGC‑AAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGCCAG > NC_002947/4838‑5122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |