| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 772,183 | G→A | 9.9% | intergenic (+44/‑155) | PP_0663 → / → PP_0664 | AsnC family transcriptional regulator/homoserine dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 772,183 | 0 | G | A | 9.9% | 219.6 / 9.6 | 80 | intergenic (+44/‑155) | PP_0663/PP_0664 | AsnC family transcriptional regulator/homoserine dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (36/36); new base A (4/4); total (40/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.33e-01 | |||||||||||
CTCCAGCCCGGAGCGGGTGCACCATGTGTGGAAGGAAATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGACCCACTGCCTGGACAGGACA > NC_002947/772040‑772330 | cTCCAGCCCGGAGCGGGTGCACCATGTGTGGAAGGAAATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAg > 2:17081/1‑149 (MQ=255) cgtaGCGGGTGCACCATGTGTGGAAGGAAATCGCTGCCATTCCCGGGGGGGAGAACTCGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTTGCACAACGCCGCCTGGGCGCGAACCCAGGCGGCGtt < 6:39668/146‑1 (MQ=38) gggTGCACCATGTGTGGAAGGAAATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGt > 6:242119/1‑149 (MQ=255) tGCACCATGTGTGGAAGGAAATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGtttt < 4:77386/149‑1 (MQ=255) tGCACCATGTGTGGAAGGAAATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGtttt > 7:124283/1‑149 (MQ=255) cACCATGTGTGGAAGGAAATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGATCCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTg < 1:29712/148‑1 (MQ=255) aCCATGTGTGGAAGGAAATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGcc > 4:95420/1‑149 (MQ=255) aCCATGTGTGGAAGGAAATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGcc > 5:292513/1‑149 (MQ=255) aTGTGTGGAAGGAAATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTg > 5:125085/1‑149 (MQ=255) ggaaggaaATCGCTGCCATGGCCGGGGTGGAGAACACGGTGTCTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGGTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑g < 5:306164/149‑1 (MQ=255) gaaggaaATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑gg > 4:258085/1‑149 (MQ=255) gaaggaaATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑gg > 2:77744/1‑149 (MQ=255) gaaggaaATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑gg > 5:56885/1‑149 (MQ=255) aaggaaATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGt > 6:8845/1‑149 (MQ=255) aaggaaATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGt > 1:140743/1‑149 (MQ=255) aggaaATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGCGCGAACCCAGGCGGCGTTGT‑‑Gctagc > 7:293329/1‑129 (MQ=38) aggaaATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGCGCGAACCCAGGCGGCGTTGT‑‑Gctagc < 8:293329/133‑5 (MQ=38) gaaATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTgcg > 6:50350/1‑149 (MQ=255) gaaATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTgcg < 5:242119/149‑1 (MQ=255) gaaATCGCTGCCATGCCCGGGGGGGAGAACACGGTGACTTGGTGCGTCCTGGCCGCGGTGGGCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTgcg < 6:51623/149‑1 (MQ=255) gCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCttt < 6:125085/149‑1 (MQ=255) ccATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGTGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCAc > 2:84081/1‑149 (MQ=255) ccGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGc > 4:88027/1‑147 (MQ=255) ggTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGAtt < 2:140743/149‑1 (MQ=255) tGGAGAAGACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTgg < 6:292513/149‑1 (MQ=255) tGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTgg < 3:95420/149‑1 (MQ=255) tGGAGAACACGGGGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTgg < 8:157567/149‑1 (MQ=255) gagaACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGc > 1:178188/1‑148 (MQ=255) gagaACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGc < 3:88027/148‑1 (MQ=255) gagaACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGc < 5:50350/148‑1 (MQ=255) gaACACGGTGACTTCGTTCGTCCTGGCCGGGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCaa < 3:60632/149‑1 (MQ=255) gaACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCaa > 6:248723/1‑149 (MQ=255) aaCACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCaat < 5:114604/149‑1 (MQ=255) cacGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCaat > 4:61770/1‑147 (MQ=255) cacGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCaat < 3:61770/147‑1 (MQ=255) acGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAggcggc < 7:158469/90‑1 (MQ=255) acGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAggcggc > 8:158469/1‑90 (MQ=255) acGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCaataaa < 2:178188/149‑1 (MQ=255) acGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCaataaa > 6:18115/1‑149 (MQ=255) ggTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCaataaata > 8:271508/1‑149 (MQ=255) gTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATAc < 5:8845/149‑1 (MQ=255) aCTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAg < 1:77744/148‑1 (MQ=255) aCTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGc < 5:18115/149‑1 (MQ=255) ttcgtCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTg > 7:65276/1‑149 (MQ=255) gtCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCa < 1:215446/149‑1 (MQ=255) ccTGGCCGCGGTGGTCTGAACCGCGTCTTTGCAGTTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGa > 1:197242/1‑142 (MQ=255) ccTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGa < 2:197242/141‑1 (MQ=255) ggCCGGGGTGGTCTGAACCGCGTGTTTGCA‑TTGGCTATCACAACGCCGGCTGGGTTCGCGCCCAGGCGGTGTTGT‑‑GCGTTTTGCCCTGGCGCACGGTGCGCGCTTTGCACTGGCCAAATTGGCCAATAAATACAGCGGATTGCCATAtt < 1:84081/149‑1 (MQ=255) ggCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATAtt > 5:152554/1‑148 (MQ=255) gCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTc < 3:258085/148‑1 (MQ=255) cgcgGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAAc < 6:152554/149‑1 (MQ=255) gtggtCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTgg > 4:136691/1‑148 (MQ=255) cTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGTGAGCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGt > 1:91961/1‑149 (MQ=255) tGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAATCTGGCCagt > 5:242093/1‑111 (MQ=255) tGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAATCTGGCCagt < 6:242093/113‑3 (MQ=255) aaCCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCAc < 5:248723/148‑1 (MQ=255) cgcgTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGct > 2:73729/1‑149 (MQ=255) cgcgTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCAGATTCAACTGGCAGTGCACGGct > 8:208862/1‑149 (MQ=255) gcgTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGctc < 1:73729/149‑1 (MQ=255) cTTTGCA‑TGGGCTAGCACAACGCCGCCGGCGTGCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTAc < 8:124850/149‑1 (MQ=255) ttGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGc > 8:167003/1‑149 (MQ=255) tGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTAc < 1:17081/146‑1 (MQ=255) cA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTa < 7:271508/148‑1 (MQ=255) ttGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTc < 6:56885/149‑1 (MQ=255) gCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCt > 7:141520/1‑148 (MQ=255) gCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTc > 3:62274/1‑149 (MQ=255) acgCACAACGCCGCCTGGGCGCGAACCCAGGCGGCGTTGA‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCATTGCACTCGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCATCTGGCAGTGCACGGATCTTACGCTAGTCCTCAt > 4:241710/3‑149 (MQ=38) cacaACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGa > 8:33256/1‑149 (MQ=255) aaCGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACgg > 6:177501/1‑124 (MQ=255) aaCGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACgg < 5:177501/124‑1 (MQ=255) aaCGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGAcc > 1:92845/1‑148 (MQ=255) aaCGCCGCCTGGGCGCGAACCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCAt > 3:30448/1‑143 (MQ=255) aaCGCCGCCTGGGCGCGAACCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCAt < 4:30448/143‑1 (MQ=255) cgccgcCTGGGTTCGCGCCCAGGCGGCGTTTT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGACCCa < 1:274415/148‑1 (MQ=255) cgccgcCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGACCCa > 2:274415/1‑148 (MQ=255) ccgccTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCAGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGACCCACTg > 1:104706/1‑149 (MQ=255) cgccTGGGCGCGAACCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGt > 1:276684/1‑113 (MQ=39) cgccTGGGCGCGAACCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGt < 2:276684/113‑1 (MQ=39) ggTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGACCCACTGCCTgga < 7:167003/148‑1 (MQ=255) ttCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGACCCACTGCCTggacag < 7:33256/149‑1 (MQ=255) cgcCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGACCCACTGCCTggacaggaca < 3:136691/149‑1 (MQ=255) gcCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGACCCACTg > 3:199514/1‑135 (MQ=255) gcCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGACCCACTg < 4:199514/135‑1 (MQ=255) | CTCCAGCCCGGAGCGGGTGCACCATGTGTGGAAGGAAATCGCTGCCATGCCCGGGGTGGAGAACACGGTGACTTCGTTCGTCCTGGCCGCGGTGGTCTGAACCGCGTCTTTGCA‑TTGGCTAGCACAACGCCGCCTGGGTTCGCGCCCAGGCGGCGTTGT‑‑GCGTTTTGCCCTGGCGCA‑GGTGCGCGCTTTGCACTGGCCAGATTGGCCAATAAATACAGCGGATTGCCATATTCAACTGGCAGTGCACGGCTCTTACGCTAGTCCTCATCGACCCACTGCCTGGACAGGACA > NC_002947/772040‑772330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |