Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 793,656 T→C 8.6% intergenic (‑21/‑203) PP_0679 ← / → PP_0680 hypothetical protein/ATP‑dependent protease‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947793,6560TC 8.6% 159.5 / 4.7 58intergenic (‑21/‑203)PP_0679/PP_0680hypothetical protein/ATP‑dependent protease‑like protein
Reads supporting (aligned to +/- strand):  ref base T (26/27);  new base C (2/3);  total (28/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

AACAGCATGTTGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAGGCGC  >  NC_002947/793508‑793804
                                                                                                                                                    |                                                                                                                                                    
aaCAGCATGTTGCCACAGGCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTTAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGTCAACt                                                                                                                                                      <  3:30896/149‑1 (MQ=255)
   aGCATGTTGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCgg                                                                                                                                                   >  5:35847/1‑149 (MQ=255)
     cATGTTGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGtt                                                                                                                                                 <  4:122559/149‑1 (MQ=255)
         ttGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGcc                                                                                                                                              <  6:35847/148‑1 (MQ=255)
         ttGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTCCTGGCAACCGAGTTGcc                                                                                                                                              <  8:133448/148‑1 (MQ=255)
           gCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTCAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAg                                                                                                                                            <  1:20492/148‑1 (MQ=255)
              ccAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCg                                                                                                                                        >  2:275577/1‑149 (MQ=255)
               cAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTCCTGGCAACCGAGTTGCCAgaaacc                                                                                                                                       <  5:164893/149‑6 (MQ=255)
                    gCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAg                                                                                                                                  <  4:28110/149‑1 (MQ=255)
                       gTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCtt                                                                                                                               >  7:202892/1‑149 (MQ=255)
                             gccgccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcacc                                                                                                                         >  1:170673/1‑149 (MQ=255)
                                 ccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcacccacc                                                                                                                     >  7:114645/1‑149 (MQ=255)
                                   tGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGcc                                                                                                                                              >  6:195480/1‑122 (MQ=255)
                                   tGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGcc                                                                                                                                              <  5:195480/122‑1 (MQ=255)
                                     gcgcTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCcgcg                                                                                                                 <  6:32800/149‑1 (MQ=255)
                                           cGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGc                                                                                                             <  6:134611/147‑1 (MQ=255)
                                           cGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGc                                                                                                             <  8:202892/147‑1 (MQ=255)
                                            ggCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTg                                                                                                          <  4:175117/149‑1 (MQ=255)
                                            ggCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTg                                                                                                          >  7:139639/1‑149 (MQ=255)
                                              ccATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGa                                                                                                        <  5:297336/149‑1 (MQ=255)
                                              ccATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCGTg                                                                                                          >  4:226681/1‑147 (MQ=255)
                                                   gCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTa                                                                                                   <  1:126643/149‑1 (MQ=255)
                                                      ttCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTGCTCTTTGTCTTAACCAAGGGTCATGGTTTCTGGCATCTCGGGTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGc                                                                                                <  5:213904/149‑1 (MQ=255)
                                                         aGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCAc                                                                                              >  2:129221/1‑148 (MQ=255)
                                                               aCCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTaa                                                                                       <  1:129221/149‑1 (MQ=255)
                                                                         aCAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgtt                                                                             >  1:108848/1‑149 (MQ=255)
                                                                            gagTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgttgtt                                                                          <  8:114645/149‑1 (MQ=255)
                                                                                 cccAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGAtt                                                                      <  5:39748/148‑1 (MQ=255)
                                                                                    agaagaATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTgag                                                                   >  8:229016/1‑146 (MQ=255)
                                                                                    agaagaATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTATCACCCACCCGCGCAGCTTCGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCg                                                                   >  4:4646/1‑148 (MQ=255)
                                                                                     gaagaaTCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGaa                                                                 <  8:139639/149‑1 (MQ=255)
                                                                                             cGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCa                                                                                               >  4:102970/1‑111 (MQ=255)
                                                                                              gTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCt                                                        <  1:275577/149‑1 (MQ=255)
                                                                                               tttCATAGCATTTGTTCTCTTTGTCTTAACCACGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTg                                                       <  5:15974/149‑1 (MQ=255)
                                                                                                    tAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTcac                                                   >  5:176762/1‑148 (MQ=255)
                                                                                                        aTTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGAc                                              <  2:170673/149‑1 (MQ=255)
                                                                                                           tGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTg                                            >  8:191944/1‑148 (MQ=255)
                                                                                                            gTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCggg                                                                                                                                      >  5:85838/1‑57 (MQ=255)
                                                                                                            gTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCggg                                                                                                                                      <  6:85838/57‑1 (MQ=255)
                                                                                                            gTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGc                                           <  7:191944/148‑1 (MQ=255)
                                                                                                                  tttGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCGAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCgg                                      <  4:185743/147‑1 (MQ=255)
                                                                                                                  tttGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGca                                    >  3:185743/1‑148 (MQ=255)
                                                                                                                      tCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTAACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGa                                >  1:219077/1‑149 (MQ=255)
                                                                                                                      gatctaCCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGa                                <  1:24691/144‑1 (MQ=255)
                                                                                                                        ttAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACa                              >  4:54951/1‑149 (MQ=255)
                                                                                                                        ttAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACa                              >  5:192097/1‑149 (MQ=255)
                                                                                                                            ccAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGa                                >  2:24691/1‑143 (MQ=255)
                                                                                                                            ccAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATaaa                          >  3:219339/1‑149 (MQ=255)
                                                                                                                            ccAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATa                            >  2:43936/1‑147 (MQ=255)
                                                                                                                              aaGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCAACCACCCGCGCAGCTTGGATTTTAGGAACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAg                         >  1:273402/1‑148 (MQ=255)
                                                                                                                                   tCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCAcc                                        <  2:73658/128‑1 (MQ=255)
                                                                                                                                     aGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTgg                 <  6:176762/149‑1 (MQ=255)
                                                                                                                                      gggTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTg                  >  3:262483/1‑147 (MQ=255)
                                                                                                                                         gaccTGGCAACCGAGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGcc             >  8:191418/4‑149 (MQ=255)
                                                                                                                                          accTGGCAACCGAGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCt            >  5:26330/3‑149 (MQ=255)
                                                                                                                                            cTGGCAACCGAGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTg          <  7:191418/149‑1 (MQ=255)
                                                                                                                                             tGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgttg                                                                            >  1:288211/1‑82 (MQ=255)
                                                                                                                                             tGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgttg                                                                            <  2:288211/82‑1 (MQ=255)
                                                                                                                                               gCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGc         <  7:229016/147‑1 (MQ=255)
                                                                                                                                                    tCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAGgcgc  >  6:120280/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AACAGCATGTTGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCACCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAGGCGC  >  NC_002947/793508‑793804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑