Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 821,679 G→C 6.5% M350I (ATG→ATC PP_0707 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947821,6790GC 6.5% 188.6 / 3.1 61M350I (ATG→ATCPP_0707hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (33/24);  new base C (2/2);  total (35/26)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01

GTGTTCAGTGCCTTCATCACAGGCCTGGGCCGCGCCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTGCGCAAGCATGACCTGGA  >  NC_002947/821536‑821825
                                                                                                                                               |                                                                                                                                                  
gtgtTCAGTGCCTTCATCACAGGCCTGGGCCGCGCCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCAtgatga                                                                                                                                                <  2:190015/148‑1 (MQ=255)
 tgtTGAGTGCCTTCATCACAGGCCTGGGCCGCGCCTTGATGATGCTGCAGCGTCCGTCCTGGCGGTTGACGGCTATCCACGACTAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGAcc                                                                                                                                              <  2:60124/149‑1 (MQ=255)
      aGTGCCTTCATCACAGGCCTGGGCCGCGCCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATg                                                                                                                                           >  2:213325/1‑147 (MQ=255)
          ccTTCATCACAGGCCTGGGCCGCGCCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAgcg                                                                                                                                      >  6:100989/1‑148 (MQ=255)
          ccTTCATCACAGGCCTGGGCCGCGCCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAgcg                                                                                                                                      >  7:4234/1‑148 (MQ=255)
           cTTCATCACAGGCCTGGGCCGCGCCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCa                                                                                                                                    >  1:18021/1‑149 (MQ=255)
                    aGGCCTGGGCCGCGCCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCg                                                                                                                           <  7:258872/149‑1 (MQ=255)
                        cTGGGCCGCGCCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATg                                                                                                                                           >  7:178172/1‑129 (MQ=255)
                        cTGGGCCGCGCCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATg                                                                                                                                           <  8:178172/129‑1 (MQ=255)
                        cTGGGCCGCGCCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGAt                                                                                                                       >  2:297486/1‑149 (MQ=255)
                               gcgcCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGc                                                                                                                 >  1:297066/1‑148 (MQ=255)
                                        tgatgctgCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGa                                                                                                                        <  2:186998/132‑1 (MQ=255)
                                        tgatgctgCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGa                                                                                                                        >  1:186998/1‑132 (MQ=255)
                                          atgctgCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCt                                                                                                     >  2:92263/1‑149 (MQ=255)
                                                gaGCGTCGGTGCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACgg                                                                                                <  2:297066/147‑1 (MQ=255)
                                                 aGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTg                                                                                              <  1:92263/149‑1 (MQ=255)
                                                  gCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTgg                                                                                             >  1:92627/1‑149 (MQ=255)
                                                    gtccgtccTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCAt                                                                                                                                   >  7:86706/1‑109 (MQ=255)
                                                    gtccgtccTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCAt                                                                                                                                   <  8:86706/109‑1 (MQ=255)
                                                       cgtccTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACgg                                                                                                >  8:274793/1‑141 (MQ=255)
                                                       cgtccTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACgg                                                                                                <  7:274793/141‑1 (MQ=255)
                                                           cTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGgc                                                                                                        >  6:77098/1‑129 (MQ=255)
                                                           cTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGgc                                                                                                        <  5:77098/129‑1 (MQ=255)
                                                              gCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGTTGACGGCCACCGTCAGCgcca                                                                                 <  7:27401/149‑4 (MQ=255)
                                                                 gtggCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGa                                                                              <  4:82228/146‑1 (MQ=255)
                                                                          gATCCACGACGGAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACggg                                                                                  <  2:80592/136‑1 (MQ=255)
                                                                          gATCCACGACGGAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACggg                                                                                  >  1:80592/1‑136 (MQ=255)
                                                                          gATCCACGACGGAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACggg                                                                                  <  6:37942/136‑1 (MQ=255)
                                                                          gATCCACGACGGAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACggg                                                                                  >  5:37942/1‑136 (MQ=255)
                                                                               acgacgAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCtggtggtg                                                                >  2:197315/1‑149 (MQ=255)
                                                                                       gTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCAc                                                        <  1:297486/149‑1 (MQ=255)
                                                                                       gTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCAc                                                        >  3:159394/1‑149 (MQ=255)
                                                                                           ccAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCttt                                                    <  1:197315/149‑1 (MQ=255)
                                                                                            cAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTg                                                   >  8:44707/1‑149 (MQ=255)
                                                                                             aGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGc                                                  <  5:100989/149‑1 (MQ=255)
                                                                                                   ctgggctggTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGgcgc                                            >  5:21475/1‑149 (MQ=255)
                                                                                                           gTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCtgt                                    >  8:60386/1‑149 (MQ=255)
                                                                                                           gTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCtgt                                    <  8:4234/149‑1 (MQ=255)
                                                                                                           gTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCtgt                                    >  7:245445/1‑149 (MQ=255)
                                                                                                               ccGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTa                                >  6:104861/1‑149 (MQ=255)
                                                                                                                cGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGctgctg                                     <  2:74307/143‑1 (MQ=255)
                                                                                                                cGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGctgctg                                     >  1:74307/1‑143 (MQ=255)
                                                                                                                 gAAGGTGCTGGCATTGGCACTGATGGTGATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCtggtggtgg                                                               >  1:221015/1‑116 (MQ=255)
                                                                                                                 gAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCtggtggtgg                                                               <  2:221015/116‑1 (MQ=255)
                                                                                                                      tGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCt                                                           >  6:281119/1‑115 (MQ=255)
                                                                                                                      tGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCt                                                           <  5:281119/115‑1 (MQ=255)
                                                                                                                       gCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCa                        >  3:202730/1‑149 (MQ=255)
                                                                                                                        cTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCAc                       <  4:202730/149‑1 (MQ=255)
                                                                                                                            cATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTg                   >  4:4631/1‑149 (MQ=255)
                                                                                                                                 gCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTgcgc                >  3:261750/1‑147 (MQ=255)
                                                                                                                                 gCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACAGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTgcgc                >  4:131854/1‑147 (MQ=255)
                                                                                                                                   aCTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTGCGCAAg             >  2:193719/1‑148 (MQ=255)
                                                                                                                                   aCTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTGCGCAAGc            <  1:213325/149‑1 (MQ=255)
                                                                                                                                    tccaTGGTCATCATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGgc                                              <  2:49002/111‑1 (MQ=255)
                                                                                                                                    tccaTGGTCATCATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTGCGCAAGCa           >  2:268365/4‑149 (MQ=255)
                                                                                                                                    tccaTGGTCATCATGACCATGGAGCGCATGAACAGCATGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGgc                                              >  1:49002/4‑114 (MQ=255)
                                                                                                                                       aTGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCTCCCTGCGcatgcatg         <  2:18021/148‑1 (MQ=255)
                                                                                                                                        tGGTCATCATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTGCGCAAGCATGAc       <  1:268365/149‑1 (MQ=255)
                                                                                                                                           tCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGACTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTGCGCAAGCATGACCTg    >  4:47031/1‑149 (MQ=255)
                                                                                                                                            cATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACcgccgc                         >  6:173397/1‑127 (MQ=255)
                                                                                                                                            cATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACcgccgc                         <  5:173397/127‑1 (MQ=255)
                                                                                                                                            cATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTGCGCAAGCATGACCTg    >  7:248424/1‑148 (MQ=255)
                                                                                                                                             atgatgACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTGCGCAAGCATGACCTgg   <  4:261750/148‑1 (MQ=255)
                                                                                                                                             atgatgACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTGCGCAAGCATGACCTGGa  <  7:60386/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                  
GTGTTCAGTGCCTTCATCACAGGCCTGGGCCGCGCCATGCTGATGCTGCAGCGTCCGTCCTGGCGGTTGCCGGCGATCCACGACGAAGTCGCCAGTGCGCTGGGCTGGTTCCCGAAGGTGCTGGCATTGGCACTGATGGTCATGATGACCATGGAGCGCATGAACAGCGTGATCGGTGCCAGCCTGGCGCTGACGGTGGCCGTCAACGGGCTGACCGCGCTGGTGGTGGCGCTCACCTTTGCAGGCGCGCTGCTGTGTTACCGCCGCACCCTGCGCAAGCATGACCTGGA  >  NC_002947/821536‑821825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: