| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 123,699 | C→T | 5.7% | A57T (GCA→ACA) | znuB ← | zinc ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 123,699 | 0 | C | T | 5.7% | 209.9 / 2.4 | 71 | A57T (GCA→ACA) | znuB | zinc ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (33/33); new base T (2/2); total (35/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 | |||||||||||
TCGTGCATGAAGCTCAGCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAACCAGTGCCAGGGACAAGCCGGCAAGC > NC_002947/123551‑123841 | tCGTGCATGAAGCTCAGCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGc > 6:214960/1‑149 (MQ=255) tGCATGAAGCTCAGCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCggg < 4:45586/149‑1 (MQ=255) tGAAGCTCAGCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTg > 6:256854/1‑149 (MQ=255) gAAGCTCAGCACCACCAGGCCCAGCGAGCAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCt > 1:12852/1‑148 (MQ=255) gAAGCTCAGCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGa > 6:189981/1‑149 (MQ=255) gAAGCTCAGCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGa > 5:197827/1‑149 (MQ=255) aaGCTCAGCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGa < 3:115161/148‑1 (MQ=255) aGCTCAGCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCTGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACa < 4:15325/149‑1 (MQ=255) cTCAGCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATc < 5:214960/149‑1 (MQ=255) aGCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAg > 7:249518/1‑149 (MQ=255) gCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAgg < 2:12852/149‑1 (MQ=255) gCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAgg < 5:155732/149‑1 (MQ=255) caccacCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAggg < 6:197827/149‑1 (MQ=255) caccaGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCaa < 5:189981/149‑1 (MQ=255) gCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGccc > 5:1499/1‑148 (MQ=255) cccAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCaa < 8:249518/149‑1 (MQ=255) ccAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAg > 6:243704/1‑149 (MQ=255) gA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGTGGGGCTGACATCCAGGGCAAAGCCCAAGGCca > 8:10970/1‑148 (MQ=255) gA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGTGGGGCTGACATCCAGGGCAAAGCCCAAGGCca > 8:6406/1‑148 (MQ=255) gTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGcc < 1:293590/141‑1 (MQ=255) gTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGcc > 2:293590/1‑141 (MQ=255) tGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGagcagc > 5:153962/1‑149 (MQ=255) aCCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACAcc > 1:262569/1‑129 (MQ=255) aCCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACAcc < 2:262569/129‑1 (MQ=255) cAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAggg < 4:5981/149‑1 (MQ=255) aggaggGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCTCCAGCAGAATCGGCAGCAACAGGCAGCCCACGGGTAGCGCC‑AGTGCGGGGCTGACATGCAGGGCAAAGCCCAAGGCCAGACCGAGGAGCGCGGCGTGAGACAGGgt < 1:137450/149‑1 (MQ=255) tgtCGGAGGCCAGCGGCTGGCGTTGCTGCAATTGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCCCACCGAGCAGCGCGGCGTGTGACAGGGTGTCGc > 1:188866/1‑148 (MQ=255) gtCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCcaca > 4:154203/1‑115 (MQ=255) gtCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCcaca < 3:154203/115‑1 (MQ=255) ggAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAAt < 6:153962/149‑1 (MQ=255) gAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATa < 6:1499/149‑1 (MQ=255) ggCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAgg < 7:30527/149‑1 (MQ=255) cAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCa > 6:38188/1‑149 (MQ=255) cAGCGGCTGGCGTTGCTGCAA‑AGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCCACCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCa > 7:6095/1‑149 (MQ=255) aGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCgcggcg > 5:296774/1‑120 (MQ=255) aGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCgcggcg < 6:296774/120‑1 (MQ=255) ggCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAg < 8:3206/137‑1 (MQ=255) ggCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAg > 7:3206/1‑137 (MQ=255) gCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGcgccgc > 8:165709/1‑148 (MQ=255) cGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCa < 5:257694/149‑1 (MQ=255) gctgcAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATAc < 7:165709/148‑1 (MQ=255) tgcAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCCGAGTGCGGGGCTGACATCCAGGGCAAAGCCAAAGGCCACACCGACCAGCGCGGCGTGAGACAGGTTGTCGCCAAAATAGGCCATGCGCCGCCAAAcaa > 1:76221/1‑147 (MQ=255) tgcAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGGGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATg < 6:2927/135‑1 (MQ=255) tgcAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATg > 5:2927/1‑135 (MQ=255) gcAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGcc < 4:70043/121‑1 (MQ=255) gcAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGcc > 3:70043/1‑121 (MQ=255) aa‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTgaga < 1:204889/107‑1 (MQ=255) aa‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTgaga > 2:204889/1‑107 (MQ=255) aa‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGaa < 5:256854/149‑1 (MQ=255) aCCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGcc > 2:198988/1‑149 (MQ=255) ccAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGcc > 5:296848/1‑148 (MQ=255) ccAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGcc > 7:109919/1‑148 (MQ=255) cagcagAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCa < 8:109919/149‑1 (MQ=255) gAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGTGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGa < 7:6406/149‑1 (MQ=255) gAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGTGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGa < 7:10970/149‑1 (MQ=255) gAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGc < 6:157454/58‑1 (MQ=255) gAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGa > 8:252139/1‑149 (MQ=255) aaTCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGACCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCTCCATACCACGAAGGAGCCCAGTGGAc < 8:6095/149‑1 (MQ=255) aGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAACCAGTGc > 5:231016/1‑149 (MQ=255) ggCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAACCAGTGc > 6:235640/1‑148 (MQ=255) aGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAAc > 8:82501/1‑139 (MQ=255) aGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAAc < 7:82501/139‑1 (MQ=255) cccACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAACCAGTGCCAGGGa < 5:243704/149‑1 (MQ=255) cGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAACCa > 8:49368/1‑128 (MQ=255) cGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAACCa < 7:49368/128‑1 (MQ=255) cGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAACCAGTGCCAGGGACAAGCCGgcaa < 7:252139/149‑1 (MQ=255) cGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAACCAGTGCCAGGGACAAGCCGgc > 5:42052/1‑147 (MQ=255) c‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAACCAGTGCCAGGGACAAGCCGgcaagc > 8:168692/1‑148 (MQ=255) tGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGcgccgc > 5:165954/1‑88 (MQ=255) tGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGcgccgc < 6:165954/88‑1 (MQ=255) tGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGa < 7:111035/102‑1 (MQ=255) tGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCAGCCATACCACGAAGGa > 8:111035/1‑102 (MQ=255) | TCGTGCATGAAGCTCAGCACCACCAGGCCCAGCGA‑CAAGGTGCTGGGGGCCAGGATACCCAGGAGGGTGTCGGAGGCCAGCGGCTGGCGTTGCTGCAA‑TGTCACCAGCAGAATCGCCAGCAACAGGCAGCCCACGGTTACCGCC‑AGTGCGGGGCTGACATCCAGGGCAAAGCCCAAGGCCACACCGAGCAGCGCGGCGTGAGACAGGGTGTCGCCAAAATAGGCCATGCGCCGCCATACCACGAAGGAGCCCAGTGGACCTGCAACCAGTGCCAGGGACAAGCCGGCAAGC > NC_002947/123551‑123841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |