| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 908,340 | G→T | 5.1% | A290D (GCC→GAC) | cra ← | catabolite DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 908,340 | 0 | G | T | 5.1% | 257.2 / 3.0 | 79 | A290D (GCC→GAC) | cra | catabolite DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (35/40); new base T (2/2); total (37/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 | |||||||||||
GGTGTCGATCAGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTACGAAGTGGTCACCAGAGCAT > NC_002947/908193‑908487 | ggtgtCGATCAGGCGCATGTTCAGGCCACTNAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGc > 1:28328/1‑149 (MQ=255) tgtCGATCAGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCa > 3:244240/1‑149 (MQ=255) gtCGATCAGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCAt > 7:275725/1‑149 (MQ=255) tCGATCAGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATg < 8:101982/149‑1 (MQ=255) gATCAGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGc < 1:227321/149‑1 (MQ=255) aGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCAtt < 4:244240/148‑1 (MQ=255) aGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCAtt < 2:282060/148‑1 (MQ=255) gcATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTTGCCATGCTGCTGGGCCATGGCATTGACcg > 5:197694/1‑149 (MQ=255) gcATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACcg > 6:109661/1‑149 (MQ=255) cAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACcggcagcg < 1:149837/148‑1 (MQ=255) tgCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACcggcagcggca < 6:178498/148‑1 (MQ=255) aCTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAgg > 5:92901/1‑147 (MQ=255) aCTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGaa < 7:236429/149‑1 (MQ=255) tGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGt > 8:77687/1‑149 (MQ=255) agaTGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTc > 1:214639/1‑148 (MQ=255) agaTGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCCGGTCAATGCCATGGCCcagcagcat > 6:155218/1‑137 (MQ=255) agaTGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCCGGTCAATGCCATGGCCcagcagcat < 5:155218/139‑3 (MQ=255) gaTGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGa < 7:77687/149‑1 (MQ=255) gTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAAc > 3:55133/1‑149 (MQ=255) ttGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCCGGTCAATGCCATGGCCcagcagcatg < 4:142903/133‑4 (MQ=38) ttGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCCGGTCAATGCCATGGCCcagcagcatg > 3:142903/1‑130 (MQ=38) cTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGt > 3:171034/1‑149 (MQ=255) ttGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGtt > 4:272722/1‑149 (MQ=255) gAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGt < 6:110577/149‑1 (MQ=255) aaGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTc < 7:79941/149‑1 (MQ=255) aaGGTGCGGCCAACGGCGGGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTc < 2:167822/149‑1 (MQ=255) gCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAgg > 6:309539/1‑149 (MQ=255) aacccGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAgg > 8:245737/5‑148 (MQ=255) cAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGa > 5:164955/1‑126 (MQ=255) cAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGa < 6:164955/126‑1 (MQ=255) cAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTa > 7:56032/1‑149 (MQ=255) aCGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGGGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTAcc < 8:275725/149‑1 (MQ=255) gTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCt < 4:55133/149‑1 (MQ=255) gTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCt > 1:131312/1‑149 (MQ=255) aCGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAg < 8:56032/149‑1 (MQ=255) aCGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAg < 3:272722/149‑1 (MQ=255) gCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGtt > 5:76253/1‑149 (MQ=255) cGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACAGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTgg > 8:207942/1‑149 (MQ=255) gTTCATAGCGTTTTTCCTCGATGGCGGCCAGTTCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGgcgc < 2:28328/149‑1 (MQ=255) gTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAAc < 8:263756/113‑1 (MQ=255) gTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGgcgc < 7:245737/149‑1 (MQ=255) gTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGgcgc < 2:214639/149‑1 (MQ=255) cATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGa < 4:210931/148‑1 (MQ=255) aGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAg < 1:305539/103‑1 (MQ=255) aGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAg > 2:305539/1‑103 (MQ=255) tttttCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCg > 2:14465/1‑149 (MQ=255) cTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGgcgc < 5:470/133‑1 (MQ=255) cTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGgcgc > 6:470/1‑133 (MQ=255) cTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGgcgcg > 7:280058/1‑149 (MQ=255) tCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGgcgcgc > 2:93486/1‑149 (MQ=255) gctgtcggcCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGgcgcgc < 8:231085/142‑1 (MQ=255) gATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCt > 2:28273/1‑149 (MQ=255) gATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCt > 3:78664/1‑149 (MQ=255) aTGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTg < 5:309539/149‑1 (MQ=255) gcggcCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAg < 4:171034/149‑1 (MQ=255) cggcCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAgg < 6:92901/149‑1 (MQ=255) gccagtgccagtTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGgt < 4:78664/149‑1 (MQ=255) gtgccagtTCAAGCGCAGTGGCGGCAATCTTGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCg < 6:197694/149‑1 (MQ=255) gtgccagtTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTc > 7:91524/1‑148 (MQ=255) tgccagtTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGtt < 4:187229/87‑1 (MQ=255) tgccagtTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGtt > 3:187229/1‑87 (MQ=255) ccagtTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCaaa > 4:299095/1‑94 (MQ=255) ccagtTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCaaa < 3:299095/94‑1 (MQ=255) ccagtTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGaa < 8:280058/148‑1 (MQ=255) cagtTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAg > 1:132673/1‑118 (MQ=255) cagtTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAg < 2:132673/118‑1 (MQ=255) aaGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCt > 7:93489/1‑149 (MQ=255) gcAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCaa < 1:93486/149‑1 (MQ=255) cAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAAc < 5:109661/149‑1 (MQ=255) tGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGc < 1:14465/149‑1 (MQ=255) ggcAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACg > 8:89451/1‑148 (MQ=255) aaTCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTAc > 3:34189/1‑148 (MQ=255) tCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTACg > 4:276483/1‑147 (MQ=255) gCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTACGAAGTgg > 4:164140/1‑149 (MQ=255) ccATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTACGAAGTGGt < 2:131312/149‑1 (MQ=255) aTGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTACGAAGTGGTCa < 5:254001/149‑1 (MQ=255) tcctgGGACATGGAATTGACCCGCAGCGGCAGGAAGACGAGAAAAAGGTTGTCGCAAAAGCTACCCAGCTGCAGATGGCGAGAGTCGACCGAGCGCGCCAGGAGGGTGTCGAACACGCCCTTCAACAGAACGTACGAAGTGGTCACCa > 4:203814/3‑148 (MQ=255) ctgGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTACGAAGTGGTCACCag < 7:89451/147‑1 (MQ=255) ctgGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTACGAAGTGGTCACCa < 3:203814/146‑1 (MQ=255) gggCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTACGAAGTGGTCACCAGAGCa > 2:278632/1‑149 (MQ=255) gggCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTACGAAGTGGTCACCAGAGCa > 8:77640/1‑149 (MQ=255) ggCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTACGAAGTGGTCACCAGAGCAt < 3:114786/149‑1 (MQ=255) gCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGc > 8:131599/1‑123 (MQ=255) gCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGc < 7:131599/123‑1 (MQ=255) | GGTGTCGATCAGGCGCATGTTCAGGCCACTGAGATGCGTTGCTTGAAGGTGCGGCCAACGGCGTGCACGCCGGGTTCATAGCGTTTTTCCTCGATGGCGGCCAGTGCCAGTTCAAGCGCAGTGGCGGCAATCTGGCCATGCTGCTGGGCCATGGCATTGACCGGCAGCGGCAGGAAGTCGAGCAACTGGTTGTCGCCAAAGGTACCCAGCTGCAGTTGGCGCGAGTCGACCGGGCGCGCCTGGAGGGTGTCGAACACGCCCTGCAACAGCACGTACGAAGTGGTCACCAGAGCAT > NC_002947/908193‑908487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |