Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 134,398 T→A 8.1% D98E (GAT→GAA) ‡ PP_0129 → GGDEF domain‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947134,3980TA 8.1% 180.2 / 3.2 60D98E (GAT→GAA) ‡PP_0129GGDEF domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base T (28/27);  new base A (3/2);  total (31/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGCATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCT  >  NC_002947/134264‑134543
                                                                                                                                      |                                                                                                                                                 
tGCATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCAc                                                                                                                                      <  2:271123/148‑1 (MQ=255)
  cATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTgg                                                                                                                                   <  7:148700/149‑1 (MQ=255)
    tGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGtt                                                                                                                                 <  5:19522/149‑1 (MQ=255)
      aaGGAAATGCGCGATGTCATTCGCAGCGTCAACATGGACGCCGGCCGCGCTGTCTTGATTCCGCGCCTTGAGAAAGGGGTACTGGATTGCGAACAGCGTCGCGAAACCCGCATGAACCTGGTCAGCGATGCGCTGACCGCACTGGTTgg                                                                                                                               <  8:90855/149‑1 (MQ=255)
      aaGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCa                                                                                                                                       >  4:126326/1‑141 (MQ=255)
      aaGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCa                                                                                                                                       <  3:126326/141‑1 (MQ=255)
      aaGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCACATGAACCAGGTCAGCGCATCGCTGAcctgg                                                                                                                                       <  2:198350/141‑4 (MQ=255)
      aaGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCACATGAACCAGGTCAGCGCATCGCTGAcctgg                                                                                                                                       >  1:198350/1‑138 (MQ=255)
        ggAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATGCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGc                                                                                                                              >  1:84450/1‑148 (MQ=255)
            aTGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCGTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACt                                                                                                                         <  4:21078/149‑1 (MQ=255)
             tGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTg                                                                                                                        >  3:64717/1‑149 (MQ=255)
                gcgATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGc                                                                                                                       >  4:151797/1‑147 (MQ=255)
                       cATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTGCTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGcctgc                                                                                                              >  5:243933/1‑149 (MQ=255)
                         ttCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTGCTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGcctgccc                                                                                                            <  6:243933/149‑1 (MQ=255)
                         ttCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGcctgccc                                                                                                            >  6:219474/1‑149 (MQ=255)
                            gCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGcctgcccctg                                                                                                         <  8:184944/149‑1 (MQ=255)
                                     acaTGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGat                                                                                                <  6:253263/149‑1 (MQ=255)
                                       aTGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGTCTGCCCCTGCCCAGCGata                                                                                               >  6:297331/1‑148 (MQ=255)
                                       aTGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGata                                                                                               >  3:220715/1‑148 (MQ=255)
                                       aTGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGata                                                                                               >  4:66225/1‑148 (MQ=255)
                                         ggACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATAtct                                                                                            >  2:181544/1‑149 (MQ=255)
                                               cGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGCCCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGc                                                                                      >  6:4853/1‑149 (MQ=255)
                                               cGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGc                                                                                      >  2:48889/1‑149 (MQ=255)
                                               cGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGc                                                                                      >  3:283918/1‑149 (MQ=255)
                                                   cTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCAtt                                                                                  <  4:220715/149‑1 (MQ=255)
                                                      gCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGaa                                                                               <  4:64717/149‑1 (MQ=255)
                                                       cTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGaaa                                                                              <  1:149260/149‑1 (MQ=255)
                                                        tGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCaa                                                                                                                           <  4:251411/103‑1 (MQ=255)
                                                        tGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCaa                                                                                                                           >  3:251411/1‑103 (MQ=255)
                                                            ttGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGACCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACt                                                                         >  1:236977/1‑149 (MQ=255)
                                                               aTTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGaaa                                                                              <  2:80573/141‑1 (MQ=255)
                                                               aTTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGAATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGaaa                                                                              >  1:80573/1‑141 (MQ=255)
                                                                ttCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGc                                                                      >  1:3070/1‑148 (MQ=255)
                                                                  ccGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCg                                                                     >  1:79183/1‑147 (MQ=255)
                                                                           gagaAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTc                                                            >  1:6792/1‑147 (MQ=255)
                                                                            agaAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGa                                                          <  6:11723/148‑1 (MQ=255)
                                                                                  cGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCggg                                                   <  1:181544/149‑1 (MQ=255)
                                                                                   ggTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCgggg                                                  <  2:3070/149‑1 (MQ=255)
                                                                                          gATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGcc                                             <  2:79183/147‑1 (MQ=255)
                                                                                          gATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGcc                                             >  3:6320/1‑147 (MQ=255)
                                                                                          gATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCa                                           <  5:219474/149‑1 (MQ=255)
                                                                                          gATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCa                                           <  2:84450/149‑1 (MQ=255)
                                                                                          gATTCCGAACAGCGTCGCGAAACCCGCATGAAACAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCTAAGAAGCTCGAGGGCGGGGTTGcc                                             <  4:241886/147‑1 (MQ=255)
                                                                                             tCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGt                                         <  1:263334/148‑1 (MQ=255)
                                                                                               cGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCAc                                      <  1:48889/149‑1 (MQ=255)
                                                                                               cGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCAc                                      >  5:30092/1‑149 (MQ=255)
                                                                                                gAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCAcg                                     >  7:97666/1‑149 (MQ=255)
                                                                                                gAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGATGACCGCACTGGTTGGACAACTGCAAGGCATGCACCTGCCCAGCGATATCTCGCTGCCATTGAAAAAACTGGCTAAGAAGCTCGAGGCCGGGGTTGCCCAGTCAcg                                     >  2:206720/1‑149 (MQ=255)
                                                                                                    aGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAg                                                         <  5:263210/125‑1 (MQ=255)
                                                                                                    aGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAg                                                         >  6:263210/1‑125 (MQ=255)
                                                                                                     gCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATAGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGc                                >  7:167834/1‑149 (MQ=255)
                                                                                                      cGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCt                               <  6:30092/149‑1 (MQ=255)
                                                                                                        tCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTgc                             >  4:136801/1‑149 (MQ=255)
                                                                                                               aCCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCt                      <  4:6320/149‑1 (MQ=255)
                                                                                                                   gCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGTCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTg                  <  5:297331/149‑1 (MQ=255)
                                                                                                                        agtgcggTCAGCGCATCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGc               >  3:33020/6‑147 (MQ=255)
                                                                                                                          tgcggTCAGCGCATCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTTGGCGAGt           <  4:33020/146‑1 (MQ=255)
                                                                                                                          ccAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGACGCTGtt                   >  3:249847/1‑141 (MQ=255)
                                                                                                                             ggTCAGCGCATCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGtt          >  1:60509/1‑147 (MQ=255)
                                                                                                                                   cGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCt  >  3:84722/1‑149 (MQ=255)
                                                                                                                                      |                                                                                                                                                 
TGCATGAAGGAAATGCGCGATGTCATTCGCAGCGACAACATGGACGCCGGCCTCGCTGGCTTGATTCCGCGCCTTGAGAAAGCGGTACTGGATTCCGAACAGCGTCGCGAAACCCGCATGAACCAGGTCAGCGATGCGCTGACCGCACTGGTTGGCCAACTGCAAGGCCTGCCCCTGCCCAGCGATATCTCGCGGCCATTGAAAAAACTGGCGAAGAAGCTCGAGGGCGGGGTTGCCCAGTCACGCGAGCTGCCGCCGCTGTTGGGCGAGTTGAGCGGCT  >  NC_002947/134264‑134543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑