| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 195,559 | C→A | 29.0% | T355T (ACC→ACA) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 195,559 | 0 | C | A | 29.0% | 135.9 / 57.2 | 76 | T355T (ACC→ACA) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base C (26/28); new base A (12/10); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.56e-01 | |||||||||||
ACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACC > NC_002947/195425‑195707 | accgtgaccCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGa < 1:283015/149‑1 (MQ=34) ccTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACt < 1:129672/147‑1 (MQ=39) ccTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACt > 2:129672/1‑147 (MQ=39) cAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCg > 7:180794/1‑148 (MQ=39) aaCGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGAGTTGCAGACCCCGGCCAATGAGGTCTACAACAACGGTTCGCCCGTCAGCGGCACCATCGAGAACGACACCGGCGGTAAGTTCGAGCAACTGACCCCg > 6:47644/1‑147 (MQ=11) cAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑c < 7:260717/149‑1 (MQ=255) ggTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑ccc < 6:222811/149‑1 (MQ=255) tcaCTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCt < 4:43234/149‑1 (MQ=40) aCTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAAc > 2:116707/1‑124 (MQ=40) gAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCa < 8:180794/148‑1 (MQ=37) gAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCAGA‑CCCCGGCTCAGACAAc > 5:18029/1‑149 (MQ=255) aaaaCCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGa > 5:110933/1‑149 (MQ=37) aCCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGaa > 7:195728/1‑116 (MQ=35) aCCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGaa < 8:195728/116‑1 (MQ=35) cAGTGCAGCGGCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGt < 6:193704/149‑1 (MQ=21) aGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTc < 4:251297/149‑1 (MQ=34) aGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGacac < 6:110933/149‑1 (MQ=37) cGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGAcacca > 1:4012/1‑149 (MQ=38) gATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGAcaccaccac > 2:128812/1‑149 (MQ=39) tCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACcgc < 5:92271/148‑1 (MQ=39) ccAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGa > 5:201509/1‑149 (MQ=39) cAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCCGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGCCCACGATCAA‑CGACTCGGTCGCCACCACCCCCGCGAc > 4:292718/1‑149 (MQ=255) cAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAACCGACTCGGTCGACACCACCACCGCGa < 1:3204/149‑1 (MQ=255) aGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGAcc < 6:179778/149‑1 (MQ=39) aGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGAcc < 6:201509/149‑1 (MQ=39) cccGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGa > 1:280897/1‑149 (MQ=39) cGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACg > 6:165515/1‑149 (MQ=39) ggCCAATGACGTCTACAACAAAGGTTCGACCGTCAGCGTCACCATCGAGAACGCCCCCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACgg > 2:275951/1‑149 (MQ=255) gcgaaTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGc < 4:243145/146‑1 (MQ=0) cAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCATACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGa < 6:16797/149‑1 (MQ=38) cAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACt < 8:85649/116‑1 (MQ=33) cAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACt > 7:85649/1‑116 (MQ=33) tCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCg > 5:180735/1‑149 (MQ=37) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCAc > 1:233748/1‑149 (MQ=37) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAc > 3:118184/1‑149 (MQ=17) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAc > 5:301999/1‑149 (MQ=17) acaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAcc < 8:112928/149‑1 (MQ=17) aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCg > 3:268587/1‑148 (MQ=37) aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCg > 7:94285/1‑148 (MQ=37) aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGc < 4:89493/135‑1 (MQ=17) aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGc > 3:89493/1‑135 (MQ=17) cGGTTCTACCGTCAGCGTAACAATCGATAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAg < 6:18029/149‑1 (MQ=255) ttCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACg < 4:46187/85‑1 (MQ=33) ttCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACg > 3:46187/1‑85 (MQ=33) tgcGACCGGCAGCGTCACCATCGCGAACGCCACCGGGGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCAGGATCAA‑CGACTTGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcg < 8:137910/147‑1 (MQ=11) tCGACCGTCAGCGTCACCATCGAGAACGCCTCCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcgg > 1:26227/1‑149 (MQ=37) tCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcgg > 7:84235/1‑149 (MQ=17) gACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGgcggcg < 1:1664/149‑1 (MQ=37) aCCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGt > 3:64953/1‑149 (MQ=17) cGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGa < 6:248474/149‑1 (MQ=38) cGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTAGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGa > 5:248474/1‑149 (MQ=38) tCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGAt > 3:116316/1‑148 (MQ=17) tCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGAt > 6:153109/1‑148 (MQ=17) aGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCAc < 5:165515/149‑1 (MQ=39) gCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGgcggcg < 1:147499/141‑1 (MQ=17) gCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGgcggcg > 2:147499/1‑141 (MQ=17) aCCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTg > 2:44925/1‑138 (MQ=17) aCCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTg < 1:44925/138‑1 (MQ=17) aCCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTaca < 4:118184/148‑1 (MQ=17) ccATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGt < 8:279956/117‑1 (MQ=39) ccATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGt > 7:279956/1‑117 (MQ=39) cATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCg > 1:287307/1‑149 (MQ=17) aTCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGAGCCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCg > 1:226531/1‑149 (MQ=255) aTCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCTAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGt < 6:301999/149‑1 (MQ=12) tCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGt > 8:212522/1‑148 (MQ=39) gagaACGCCCCCGGCGGTAATTTCGAGCCACTGACCCCGAAGCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa < 8:288846/148‑1 (MQ=255) gagaACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa < 3:100822/148‑1 (MQ=39) gagaACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGAc > 8:186616/1‑149 (MQ=39) gagaACGCCAAAGGCTGTAATTTCGAGCAACTGACCACGAATCCGA‑CCCCTGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa < 8:284829/148‑1 (MQ=11) aaCGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCt < 2:26227/149‑1 (MQ=39) aaCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCCGACCACGATCAA‑CGACTCGGTCGACACCACAACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGAACACGTACACCGTGACCCt > 6:54488/1‑149 (MQ=11) aCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCg < 2:195182/117‑1 (MQ=12) aCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCg > 1:195182/1‑117 (MQ=12) cGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CGCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa < 2:233748/149‑1 (MQ=21) cGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa < 4:64953/149‑1 (MQ=17) ccACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGc < 1:128812/149‑1 (MQ=39) ccGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAc < 8:94285/149‑1 (MQ=39) cggcggTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAcc < 7:212522/149‑1 (MQ=39) | ACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGA‑CCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACC > NC_002947/195425‑195707 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |