| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 195,634 | C→T | 41.5% | T380T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 195,634 | 0 | C | T | 41.5% | 72.8 / 108.6 | 102 | T380T (ACC→ACT) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base C (26/33); new base T (20/22); total (47/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 115 total aligned reads displayed.
GATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGGGCA > NC_002947/195488‑195782 | gATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGAcaccaccac > 2:128812/1‑149 (MQ=39) ccAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGa > 5:201509/1‑149 (MQ=39) cAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACCGACTCGGTCGACACCACCACCGCGa < 1:3204/149‑1 (MQ=255) aGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGAcc < 6:201509/149‑1 (MQ=39) aGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGAcc < 6:179778/149‑1 (MQ=39) cccGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGa > 1:280897/1‑149 (MQ=39) cGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACg > 6:165515/1‑149 (MQ=39) gcgaaTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGc < 4:243145/146‑1 (MQ=0) cAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCATACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGa < 6:16797/149‑1 (MQ=38) tCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCg > 5:180735/1‑149 (MQ=37) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCAc > 1:233748/1‑149 (MQ=37) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAc > 3:118184/1‑149 (MQ=17) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAc > 5:301999/1‑149 (MQ=17) acaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAcc < 8:112928/149‑1 (MQ=17) aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCg > 3:268587/1‑148 (MQ=37) aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCg > 7:94285/1‑148 (MQ=37) aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGc < 4:89493/135‑1 (MQ=17) aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGc > 3:89493/1‑135 (MQ=17) cGGTTCTACCGTCAGCGTAACAATCGATAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAg < 6:18029/149‑1 (MQ=255) tgcGACCGGCAGCGTCACCATCGCGAACGCCACCGGGGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCAGGATCAA‑CGACTTGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcg < 8:137910/147‑1 (MQ=11) tCGACCGTCAGCGTCACCATCGAGAACGCCTCCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcgg > 1:26227/1‑149 (MQ=37) gACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGgcggcg < 1:1664/149‑1 (MQ=37) aCCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGt > 3:64953/1‑149 (MQ=17) cGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGa < 6:248474/149‑1 (MQ=38) cGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTAGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGa > 5:248474/1‑149 (MQ=38) tCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGAt > 6:153109/1‑148 (MQ=17) tCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGAt > 3:116316/1‑148 (MQ=17) aGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCAc < 5:165515/149‑1 (MQ=39) gCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGgcggcg > 2:147499/1‑141 (MQ=17) gCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGgcggcg < 1:147499/141‑1 (MQ=17) aCCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTg > 2:44925/1‑138 (MQ=17) aCCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTg < 1:44925/138‑1 (MQ=17) aCCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTaca < 4:118184/148‑1 (MQ=17) ccATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGt < 8:279956/117‑1 (MQ=39) ccATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGt > 7:279956/1‑117 (MQ=39) cATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCg > 1:287307/1‑149 (MQ=17) aTCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCTAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGt < 6:301999/149‑1 (MQ=12) tCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGt > 8:212522/1‑148 (MQ=39) gagaACGCCCCCGGCGGTAATTTCGAGCCACTGACCCCGAAGCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa < 8:288846/148‑1 (MQ=255) gagaACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa < 3:100822/148‑1 (MQ=39) gagaACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGAc > 8:186616/1‑149 (MQ=39) gagaACGCCAAAGGCTGTAATTTCGAGCAACTGACCACGAATCCGACCCCTGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa < 8:284829/148‑1 (MQ=11) aaCGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCt < 2:26227/149‑1 (MQ=39) aaCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCCGACCACGATCAA‑CGACTCGGTCGACACCACAACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGAACACGTACACCGTGACCCt > 6:54488/1‑149 (MQ=11) aCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCg < 2:195182/117‑1 (MQ=12) aCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCg > 1:195182/1‑117 (MQ=12) cGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa < 2:233748/149‑1 (MQ=21) cGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa < 4:64953/149‑1 (MQ=17) ccACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGc < 1:128812/149‑1 (MQ=39) ccGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAc < 8:94285/149‑1 (MQ=39) cggcggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAcc < 7:212522/149‑1 (MQ=39) gcggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCt < 4:268587/149‑1 (MQ=39) cggTAATTTCGAGCAACTGACCCCGAATCCGATCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTg < 1:116620/149‑1 (MQ=12) gTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGcc < 8:180413/149‑1 (MQ=17) aTTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑a < 1:35141/148‑1 (MQ=17) aTTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑a < 2:78144/148‑1 (MQ=21) aaCTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGccc > 8:269955/1‑138 (MQ=40) aaCTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGccc < 7:269955/138‑1 (MQ=40) aCTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTTACCCTGAGCAACCCTGCCC‑AGACGCCGGtga < 6:184485/149‑3 (MQ=2) aCCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCg < 1:275951/148‑1 (MQ=40) aCCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGt > 3:138916/1‑149 (MQ=255) cccGAATCCTACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGa < 2:280897/149‑1 (MQ=255) cccGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTg < 2:185986/112‑1 (MQ=17) cccGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTg > 1:185986/1‑112 (MQ=17) cccGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTg > 5:80019/1‑148 (MQ=255) cccGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa < 4:39307/119‑1 (MQ=39) ccGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGaa > 6:170132/1‑149 (MQ=255) cGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTGACCGTGacc < 6:267958/149‑3 (MQ=2) cGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCAATTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTGACCGTGacc > 6:20923/1‑147 (MQ=255) gAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAAcc > 4:195720/1‑149 (MQ=255) cGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTc > 4:288932/1‑148 (MQ=255) aCCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATAACTTACACCGTGCCCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCaa > 4:216254/1‑149 (MQ=255) cccGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACg < 8:84235/149‑1 (MQ=38) cGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGc > 4:99339/1‑149 (MQ=39) cTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAAc < 8:17394/134‑1 (MQ=39) cTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAAc > 7:17394/1‑134 (MQ=39) aGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAg > 7:213957/1‑100 (MQ=33) aGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCaaa < 2:226531/147‑1 (MQ=39) cACGATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTa > 3:201470/1‑149 (MQ=255) tttaTCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTAc < 7:33951/146‑1 (MQ=255) gATCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCg > 2:191622/1‑149 (MQ=255) tCAA‑CGACTCGGTCGGCACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGtt < 2:301721/149‑1 (MQ=255) tCAA‑CGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGtt < 4:116316/149‑1 (MQ=255) cGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGa > 2:297316/1‑137 (MQ=255) cGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGa < 1:297316/137‑1 (MQ=255) cTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCgg < 2:287307/149‑1 (MQ=255) ggTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGt < 3:195720/148‑1 (MQ=255) ggTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAAGACGCCGGTAACCGTGAACCTGTCCAACGGc < 1:188865/125‑1 (MQ=255) ggTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGt > 1:55773/1‑148 (MQ=39) gTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTaa < 5:153109/149‑1 (MQ=255) accaccaccGCCACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTCAGCAACCCAGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCa < 5:47644/149‑1 (MQ=255) ccactaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAg < 4:201470/149‑1 (MQ=255) ccaccaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAg < 3:288932/149‑1 (MQ=39) caccaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCgg > 2:275857/1‑92 (MQ=37) caccaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCgg < 1:275857/92‑1 (MQ=37) accaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAggg > 3:137672/1‑149 (MQ=39) accaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACAGTGACCCTGAGCAACCCTGCCC‑AGACGACGGTGACCGTGACCCTGTCCAACGGcc > 5:191021/1‑115 (MQ=11) ccaccGCGATCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAggg > 5:97388/1‑148 (MQ=255) caccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGGGCa < 3:99339/149‑1 (MQ=39) caccGCGACCCTGACGGCGAGCCCGTCGCTCACCGAAGGCGGCGTTATAACTTACACCGATACCCTGAGCAACCCTGCCC‑AGACGACGTAAACCGTGAACCTGTCCAACGGCCAAACGATAACCGTTGAAGCGGGTAAAACCCAggg > 4:221821/1‑147 (MQ=14) | GATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAA‑CGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCC‑AGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGGGCA > NC_002947/195488‑195782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |