Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,728,860 A→T 8.8% F83I (TTT→ATT)  PP_1523 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,728,8600AT 8.8% 160.6 / 4.3 56F83I (TTT→ATT) PP_1523hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (25/26);  new base T (2/3);  total (27/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCATTTGAAGGTATGGCCTTTCTGCTT  >  NC_002947/1728715‑1729004
                                                                                                                                                   |                                                                                                                                                  
gCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCCCTTCC‑‑ACACCCAGCGCGGCAAATgc                                                                                                                                                 >  4:204915/1‑149 (MQ=255)
  aaGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATgcgg                                                                                                                                               <  5:43898/149‑1 (MQ=255)
         ccGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGgc                                                                                                                                      <  3:83263/149‑1 (MQ=255)
         ccGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCCGCATTTGCCGC‑‑GCtgg                                                                                                                                       <  3:199280/148‑1 (MQ=255)
         ccGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCCGCATTTGCCGC‑‑GCtgg                                                                                                                                       <  6:57395/148‑1 (MQ=255)
          cGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCACCCCCCCCGCCCCGCACCGCACTACC‑‑CACCCCAGCCCGGAAATTGCGCC‑‑CCggcgg                                                                                                                                     >  7:218978/1‑146 (MQ=255)
            tttCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCa                                                                                                                                   <  7:78764/149‑1 (MQ=255)
               cATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAgg                                                                                                                                 >  7:65298/1‑148 (MQ=255)
                atgatgTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGc                                                                                                                                <  5:112763/148‑1 (MQ=255)
                         gCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCg                                                                                                                      <  8:65298/149‑1 (MQ=255)
                         gCCAGGTCATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCATCTTCCCCGTCATCCTCCACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCACCCCGGCAAATGCGGC‑‑GCCGGCGCACGCAACGTCATCg                                                                                                                      >  6:232030/1‑149 (MQ=255)
                             ggTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATc                                                                                                                       <  4:23231/144‑1 (MQ=255)
                             ggTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATc                                                                                                                       >  3:23231/1‑144 (MQ=255)
                                gATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACg                                                                                                               >  1:204021/1‑149 (MQ=255)
                                   ttCCTCTTCACAGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCCGCGCACATCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAAAGTCATCCGCCCACGGCg                                                                                                            >  8:244929/1‑149 (MQ=255)
                                    tCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGt                                                                                                           >  5:282305/1‑149 (MQ=255)
                                      ctctTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCt                                                                                                         >  1:143446/1‑149 (MQ=255)
                                       tctTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCCCCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTg                                                                                                        >  6:172547/1‑149 (MQ=255)
                                       tctTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCCGCGCCGCATTTGCCGC‑‑GCtgg                                                                                                                                       <  5:115491/118‑1 (MQ=255)
                                       tctTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCCGCGCCGCATTTGCCGC‑‑GCtgg                                                                                                                                       >  6:115491/1‑118 (MQ=255)
                                       tctTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTg                                                                                                        >  2:102694/1‑149 (MQ=255)
                                           cACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCg                                                                                                    >  6:55988/1‑149 (MQ=255)
                                                tCGGCGCTGATGCGGACCTAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCTGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTc                                                                                               <  3:166025/149‑1 (MQ=255)
                                                     gcTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGAt                                                                                          <  4:287299/149‑1 (MQ=255)
                                                             ggACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCCGAACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAgga                                                                                    >  1:249827/1‑148 (MQ=255)
                                                              gACCCTGGGGTCAGCATCTTCTCCCCGGTCTTCCTCGCCCCCGCCCCCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGt                                                                                 <  2:143446/149‑1 (MQ=255)
                                                               aCCCAGCGGTCAGCATCTTCTTCCGCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACAGCGAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATGGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGtt                                                                                <  5:232030/149‑1 (MQ=255)
                                                                        tCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCTCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTccc                                                                       <  3:163322/149‑1 (MQ=255)
                                                                            cATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACa                                                                   <  3:204915/149‑1 (MQ=255)
                                                                            cATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACa                                                                   <  7:82306/149‑1 (MQ=255)
                                                                             aTCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAg                                                                  >  4:27192/1‑149 (MQ=255)
                                                                                ttcttcCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAg                                                                                      >  8:177352/1‑126 (MQ=255)
                                                                                  cttcCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTg                                                             >  6:103795/1‑149 (MQ=255)
                                                                                     ccccGTCTTCCTCCACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCTCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTgg                                                            <  5:208184/147‑1 (MQ=255)
                                                                                                tCGACCCAGCCACCCGGCGCGAAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATCCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCAGGTCGATTTCCAGATACAGGCTGATCCATTTCCCTACAGCCTTGGGTAACCAAGTGAc                                               >  2:222894/1‑149 (MQ=255)
                                                                                                  gACCCAGCCACCCGGCGCGCTGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGAcc                                              <  3:1121/148‑1 (MQ=255)
                                                                                                  gACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCg                                             >  6:18614/1‑149 (MQ=255)
                                                                                                     ccAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGaa                                          <  6:132128/149‑1 (MQ=255)
                                                                                                      cAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAAt                                         <  3:131024/149‑1 (MQ=255)
                                                                                                        gCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGt                                       <  5:55988/149‑1 (MQ=255)
                                                                                                         ccACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGt                                       >  7:166493/1‑148 (MQ=255)
                                                                                                           aCCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTAc                                    >  5:61718/1‑149 (MQ=255)
                                                                                                             ccGGCGCGCAGCGCACTTCC‑‑ACACCCAGGGCGGCAAATTCGTCCAGCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTAc                                    <  1:102694/149‑1 (MQ=255)
                                                                                                                  gcgcagcgcaCTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTg                             >  6:127965/1‑149 (MQ=255)
                                                                                                                  gcgcagcgcaCTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTg                             <  5:172547/149‑1 (MQ=255)
                                                                                                                       gcgcaCTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCAtt                        >  1:195265/1‑149 (MQ=255)
                                                                                                                        cgtaCTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCAttt                       <  5:103795/146‑1 (MQ=255)
                                                                                                                            cTTCC‑‑ACACCGAGCGCGGCAAATGCGGC‑‑GAGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATTCAGGATGTTCCATTTCCCTACAGTCTTTGGTAAACAAGTGACCTGAATGTTACCGGCCTGGCATTTGAAg                   <  1:222894/149‑1 (MQ=255)
                                                                                                                            cTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCATTTGAAg                   <  2:195265/149‑1 (MQ=255)
                                                                                                                               cc‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCATTTGAAGGt                 <  3:27192/148‑1 (MQ=255)
                                                                                                                                       ccAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCATTTGAAGGTATGGCCt          >  6:291547/1‑149 (MQ=255)
                                                                                                                                       ccAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCATTTGAAGGTATGGCCt          >  8:139148/1‑149 (MQ=255)
                                                                                                                                           cgcgGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCATTTGAAGGTATGGCCTTTCt      <  5:291547/149‑1 (MQ=255)
                                                                                                                                               gCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCATTTGAAGGTATGGCCTTTCTGCtt  >  4:122907/1‑149 (MQ=255)
                                                                                                                                                cAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCATTTGAAg                   >  6:126860/1‑131 (MQ=255)
                                                                                                                                                cAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCATTTGAAg                   <  5:126860/131‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACTTCC‑‑ACACCCAGCGCGGCAAATGCGGC‑‑GCGGGCGCAGGCAACGTCATCGGCCCACGGCGTCTGGTCGCTTTCCAGATACAGGCTGTTCCATTTCCCTACAGCCTTGGGTAACCAAGTGACCGGAATGTTACCGGCCTGGCATTTGAAGGTATGGCCTTTCTGCTT  >  NC_002947/1728715‑1729004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑