| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,246,242 | A→G | 8.3% | intergenic (+31/+60) | ibpA → / ← PP_1983 | small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,246,242 | 0 | A | G | 8.3% | 203.0 / 6.9 | 72 | intergenic (+31/+60) | ibpA/PP_1983 | small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base A (35/31); new base G (3/3); total (38/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
AAGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGT > NC_002947/2246098‑2246381 | aaGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCa‑gag < 6:247780/148‑1 (MQ=255) gccgccGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAACCCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGc > 3:41163/1‑149 (MQ=255) gccgccGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGc < 3:4454/149‑1 (MQ=255) cgcctGCCTGGCCAATGGCCTGCTCAGCATCGACCTGATGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAAAGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGccc < 5:169090/149‑1 (MQ=255) cgccgGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGccc < 7:134011/149‑1 (MQ=255) cgccgGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGcc > 1:154947/1‑148 (MQ=255) cgccgGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGcc < 2:154947/148‑1 (MQ=255) ccgGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCtt > 3:896/1‑149 (MQ=255) ccTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTc > 3:188578/1‑149 (MQ=255) ggCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGt > 2:222293/1‑148 (MQ=255) gCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTg < 4:896/148‑1 (MQ=255) gCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGc > 3:58348/1‑149 (MQ=255) cAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCtt < 2:297878/149‑1 (MQ=255) aaTGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTg < 8:244693/145‑1 (MQ=255) aaTGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTg > 7:244693/1‑145 (MQ=255) cTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACg > 4:104868/1‑148 (MQ=255) cTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGc < 8:168588/149‑1 (MQ=255) tGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCTG‑GAGGTGccc < 3:126864/129‑1 (MQ=255) tGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCTG‑GAGGTGccc > 4:126864/1‑129 (MQ=255) tGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACg > 4:131506/1‑147 (MQ=255) aGCATCAACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTc > 7:249030/1‑147 (MQ=255) gACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAg < 1:272983/149‑1 (MQ=255) gACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAg < 6:54947/149‑1 (MQ=255) gACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAg < 4:58348/149‑1 (MQ=255) aCCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCTG‑GAGGTGCCCtttttttcgt > 3:26466/1‑122 (MQ=255) aCCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCTG‑GAGGTGCCCtttttttcgt < 4:26466/127‑6 (MQ=255) aCCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCa‑gag < 7:107342/111‑1 (MQ=255) aCCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCa‑gag > 8:107342/1‑111 (MQ=255) ccTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGATCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGt < 8:14595/149‑1 (MQ=255) ccTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTa < 2:143006/146‑1 (MQ=255) ccTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTa > 1:143006/1‑146 (MQ=255) gctgcGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTccc > 7:280660/1‑138 (MQ=255) gctgcGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTccc < 8:280660/138‑1 (MQ=255) ctgcGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTgcg < 4:188578/148‑1 (MQ=255) gcgcATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCgg > 1:162094/1‑149 (MQ=255) cgcATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCACGAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTgcgc < 1:222293/147‑1 (MQ=255) cgcATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCgg < 1:236448/148‑1 (MQ=255) aTCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGt > 5:282978/1‑149 (MQ=255) aTCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGt > 5:184573/1‑149 (MQ=255) tCGTTCCTGAAGAAGCCAAGTCCAAGCGCATTCCGATCAATCGCGAAAAACCAGCGCTGAACTGATCGAGCTGTAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTc < 3:104/149‑1 (MQ=255) ccTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCa‑ga < 5:88192/93‑1 (MQ=255) ccTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCa‑ga > 6:88192/1‑93 (MQ=255) ccTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTg < 2:165300/109‑1 (MQ=255) ccTGAAGAAGCCAAGGCCAAGCGCATGCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTg > 1:165300/1‑109 (MQ=255) gaagaaGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGAt > 4:109755/1‑148 (MQ=255) gaagaaGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGAt > 2:35010/1‑148 (MQ=255) aagaagCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATc < 7:7753/148‑1 (MQ=255) aagaagCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATc < 2:162094/148‑1 (MQ=255) aagaagCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCa < 3:104868/149‑1 (MQ=255) ccaaggccaagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATc > 4:282582/1‑149 (MQ=255) caagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGgc < 6:184573/149‑1 (MQ=255) aagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGgcg > 8:160348/1‑149 (MQ=255) cATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTcc < 3:131506/149‑1 (MQ=255) cGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCaa > 2:81488/1‑149 (MQ=255) tGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGAGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGc > 1:166237/1‑149 (MQ=255) tGGCGAAAAACCAGCGCTGAACTCATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑TAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCA‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGc > 7:54484/1‑149 (MQ=255) cGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCg > 1:161530/1‑148 (MQ=255) cAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcgg > 3:8746/1‑149 (MQ=255) gcgcTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcgg > 1:272839/1‑147 (MQ=255) gcgcTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcgg < 2:272839/147‑1 (MQ=255) cgcTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcg < 3:248597/145‑1 (MQ=255) cgcTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcg > 4:248597/1‑145 (MQ=255) tGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcggtaacggta > 1:285522/1‑146 (MQ=255) tGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcggtaacggta < 2:285522/146‑1 (MQ=255) tGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATg > 3:187473/1‑149 (MQ=255) tCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGc > 6:53566/1‑124 (MQ=255) gAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTc > 7:232537/1‑109 (MQ=255) gAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTc < 8:232537/109‑1 (MQ=255) aCGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCtgtg > 5:205957/1‑146 (MQ=255) cGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGa < 3:282582/149‑1 (MQ=255) aaaaaaGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATaa > 1:199928/1‑149 (MQ=255) aaaaaGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAAc > 7:167425/1‑149 (MQ=255) aaaaGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAAcc < 2:166237/149‑1 (MQ=255) gggCACCTCTG‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCCGGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCATCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATACCCCta > 1:218401/1‑148 (MQ=255) gggCACCTCTG‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAAccc < 2:218401/146‑1 (MQ=255) gggCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGACCGGCTGTGCAGATAACCCTgg < 1:35010/149‑1 (MQ=255) gCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAATAACCGTAACGCTAAATGCCGGCATTGCAGAAAACCCAGGt > 1:257088/1‑148 (MQ=255) | AAGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCA‑GAGGTGCCCTTTTTCGTGCTTCTCACGCAGTCCC‑GCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGT > NC_002947/2246098‑2246381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |