| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 263,186 | G→A | 8.1% | intergenic (+421/‑64) | PP_0211 → / → gabD‑I | hypothetical protein/succinate‑semialdehyde dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 263,186 | 0 | G | A | 8.1% | 176.1 / 5.0 | 65 | intergenic (+421/‑64) | PP_0211/gabD‑I | hypothetical protein/succinate‑semialdehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (29/28); new base A (3/2); total (33/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
TCTAACCTGTACTGGCCCTATCGCTGGCAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAATGGTGAGTGGCTGGATGCGGACAACGGCCAGACCATC > NC_002947/263042‑263333 | tCTAACCTGTACTGGCCCTATCGCTGGCAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGAttt < 6:132716/149‑1 (MQ=255) tACTGGCCCTATCGCTGGCAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTc > 4:165514/1‑149 (MQ=255) cttgCCCTATCGCTGGCAATCCAGCTCCCACAACCCAAAAAAGTGAAAATTACGCCAGGGTGGTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGACTATTGTCCAACACCCCAGCAGCCGATTAGCATTCGTTTGAAATCTCAAACgaatg < 2:141732/145‑5 (MQ=255) ggCCCTATCGCTGGCAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATg > 3:156312/1‑149 (MQ=255) ccTATCGCTGGCAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGccc > 5:182672/1‑149 (MQ=255) cTATCGCTGGCAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCt < 1:38727/149‑1 (MQ=255) tCGCTGGCAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGcc < 4:156312/149‑1 (MQ=255) gCAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTggg < 3:165514/148‑1 (MQ=255) gCAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGgc < 2:21914/149‑1 (MQ=255) gCAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGgc > 7:168040/1‑149 (MQ=255) cAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGgc‑‑‑g > 1:40164/1‑149 (MQ=255) aaGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGgc‑‑‑gc > 5:118352/1‑149 (MQ=255) aGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCt < 2:40164/149‑1 (MQ=255) ccAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAAATCTCAAACgaatg > 2:300003/1‑124 (MQ=255) ccAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAAATCTCAAACgaatg < 1:300003/128‑5 (MQ=255) gCTCCCACCACACCAAACAGGGAAATTTCCGCCCGGGTGTGCA‑CCCTTTTGTT‑CTTTTTTTCGACCAGCCTCTTGTCCACCCCCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTtca < 8:274333/149‑1 (MQ=255) tCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTtc < 2:210739/146‑1 (MQ=255) tCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTtc > 1:210739/1‑146 (MQ=255) ccACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTtcaacaa > 3:243904/1‑149 (MQ=255) caacacaaAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTtcaa < 5:226866/143‑1 (MQ=255) caacacaaAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTtcaa > 6:226866/1‑143 (MQ=255) aacacaaAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCtttt < 5:179851/139‑1 (MQ=255) aacacaaAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCtttt > 6:179851/1‑139 (MQ=255) cacaaAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTtcaacaatcaac > 2:149685/1‑148 (MQ=255) acaaAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAAAACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTtcaacaatcaaca > 4:173636/1‑148 (MQ=255) aaaaaaGTGAAATTTCCGCCAGGGTGTTCATACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTcaacaatcaacaat > 1:184359/1‑149 (MQ=255) aaaaaaGTGAAATTTCAGCCAGGGTGATCA‑ACCTTATGTT‑ATTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCACCCGCTTAGCAATCGTTTGATATTTCAAACTCTCGAATCCATGCCTTGGCA‑‑‑GCTTTTcaacaaacaacaat > 2:139256/1‑148 (MQ=255) aaaaaGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTc < 8:101587/149‑1 (MQ=255) aaaaGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCg > 2:178157/1‑149 (MQ=255) aaaGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCgg < 1:149685/149‑1 (MQ=255) aaGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCgg > 5:201846/1‑148 (MQ=255) tGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGACCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAg > 3:78887/1‑149 (MQ=255) tttCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGAc < 2:256409/149‑1 (MQ=255) ttCCGCCAGGGTGTTCA‑ACCTTTTGTTGCTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGa > 1:169912/1‑148 (MQ=255) tCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCATCACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACa < 1:251928/148‑1 (MQ=255) gCCAGGGTGTTAA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATg > 4:195046/1‑147 (MQ=255) cAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGc < 1:178157/149‑1 (MQ=255) cAGCGTGATCA‑ACCTTTTGTT‑CTTCTTTTCGCACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGATTGACCTATCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGCAAGCCGACATGCAGc < 4:78887/149‑1 (MQ=255) gggTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCt > 7:64014/1‑148 (MQ=255) cA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACg > 1:262305/1‑149 (MQ=255) a‑aCCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGc > 4:254921/1‑149 (MQ=255) a‑aCCTTTTGTT‑CTTTTTTTCGAACAGACTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCTAACGCTCGATGCGCTGCGTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGc < 1:139256/149‑1 (MQ=255) tttttCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTcc < 2:169912/146‑1 (MQ=255) tttCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCa < 6:118352/148‑1 (MQ=255) gAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGATATTTCAATCGCTCGATGCCCTGCCTTTGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCaa < 7:229057/148‑1 (MQ=255) gAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCaa < 2:184359/148‑1 (MQ=255) cAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCt < 4:243904/149‑1 (MQ=255) ccTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCtata < 8:168040/149‑1 (MQ=255) ccTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCtata > 4:115172/1‑149 (MQ=255) cTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCtata < 3:115172/148‑1 (MQ=255) cTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTatat < 6:182672/149‑1 (MQ=255) cTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTatat < 6:201846/149‑1 (MQ=255) tATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCt < 7:20027/144‑1 (MQ=255) tATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCt > 8:20027/1‑144 (MQ=255) ttGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGCTGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCGATATCaa > 4:223469/1‑149 (MQ=255) gTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAAt < 2:262305/148‑1 (MQ=255) tCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGCGCAGCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCaa > 1:95268/1‑149 (MQ=255) aaCACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAATGGt > 2:74771/1‑147 (MQ=255) aaCACACCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAATGGTg > 4:177262/1‑148 (MQ=255) ccAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAATGGTGAGTGGCt < 8:64014/149‑1 (MQ=255) agcagcCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAATGGTGAGTGGCTgg < 3:173636/149‑1 (MQ=255) gCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAATGGTGAGTGGCTGGATGCGGa > 8:164358/1‑149 (MQ=255) agcGTTTGAAATCTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAATGGTGAGTGGCTGGATGCGGACAACGGc > 2:113873/3‑148 (MQ=255) gcGTTTGAAATCTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAATGGTGAGTGGCTGGATGCGGACAACGGc > 3:138400/2‑147 (MQ=255) tttGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAATGGTGAGTGGCTGGATGCGGACAACGGCCAGAc > 5:271225/1‑149 (MQ=255) gaTTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAATGGTGAGTGGCTGGATGCGGACAACGGCCAGACCATc > 3:120765/1‑148 (MQ=255) | TCTAACCTGTACTGGCCCTATCGCTGGCAAGCCAGCTCCCACAACACAAAAAAGTGAAATTTCCGCCAGGGTGTTCA‑ACCTTTTGTT‑CTTTTTTTCGAACAGCCTATTGTCCAACACCCCAGCAGCCGCTTAGCATTCGTTTGAGATTTCAAACGCTCGATGCCCTGCCTTGGGC‑‑‑GCTTTTCAACAATCAACAATTCGGGAAGCCGACATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAAGCCTATATCAATGGTGAGTGGCTGGATGCGGACAACGGCCAGACCATC > NC_002947/263042‑263333 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |