| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,630,168 | A→G | 5.2% | A375A (GCA→GCG) | clpX → | ATP‑dependent Clp protease ATP‑binding subunit ClpX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,630,168 | 0 | A | G | 5.2% | 232.2 / 2.2 | 76 | A375A (GCA→GCG) | clpX | ATP‑dependent Clp protease ATP‑binding subunit ClpX |
| Reads supporting (aligned to +/- strand): ref base A (37/35); new base G (2/2); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.57e-01 | |||||||||||
GCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCAC > NC_002947/2630025‑2630308 | gCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGc > 5:196474/1‑147 (MQ=255) ccTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGccc > 5:170115/1‑149 (MQ=255) ccTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGccc > 4:289907/1‑149 (MQ=255) ccTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGccc > 4:246014/1‑149 (MQ=255) cGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCTCCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAgc > 7:188567/1‑149 (MQ=255) gAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAgcg > 4:77827/1‑149 (MQ=255) aGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAgcgc < 8:23303/149‑1 (MQ=255) cTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCaa < 1:44458/149‑1 (MQ=255) ggATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGATGTTCGAGATGGAAAGCGTCGACCACGAGTTCCGCAGCGATGCGCACAAGGCCGTA‑GCACGCAA‑GGCCCTCGAGCGCAAGa > 4:115402/1‑149 (MQ=255) gATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGAc < 1:140071/149‑1 (MQ=255) gATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGAc > 6:172015/1‑149 (MQ=255) gAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGATCCAGGGCATT‑GCGTGCAA‑CGGCCTTGAGCGCatcgctg < 8:156711/148‑7 (MQ=37) aGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTgg < 3:57288/148‑1 (MQ=255) aGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGgc < 3:289907/149‑1 (MQ=255) aGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGgc < 3:246014/149‑1 (MQ=255) gTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCCAGTCTTGCGCTccag > 7:86179/1‑146 (MQ=255) ttGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCCAGTCTTGCGCTccagg < 8:86179/149‑5 (MQ=255) aTGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGGGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTgg < 1:97487/146‑1 (MQ=255) aTGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCGGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTgg > 2:97487/1‑146 (MQ=255) gCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGc > 7:183025/1‑149 (MQ=255) gATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGtt < 6:196474/149‑1 (MQ=255) ccTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGa > 1:143244/1‑149 (MQ=255) cTCAGCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGGTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGa < 7:253524/148‑1 (MQ=255) cTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGAt > 1:34933/1‑149 (MQ=255) aCCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCt > 7:10174/1‑149 (MQ=255) gCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAATGCGTCGACCTCGAGTTCCGCAGGGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAg < 3:115402/149‑1 (MQ=255) gCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAg < 8:188567/149‑1 (MQ=255) ccGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAgg > 5:300385/1‑149 (MQ=255) agaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCgtg < 8:10174/149‑1 (MQ=255) cgcTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGTAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCt < 6:170115/148‑1 (MQ=255) gcTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGc > 4:176340/1‑139 (MQ=255) gcTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGc < 3:176340/139‑1 (MQ=255) aCCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGAt < 5:173372/147‑1 (MQ=255) aaGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCAt < 5:172015/149‑1 (MQ=255) gCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCt > 6:244894/1‑131 (MQ=255) gCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCt < 5:244894/131‑1 (MQ=255) cAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAgg < 8:256695/120‑1 (MQ=255) cAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAgg > 7:256695/1‑120 (MQ=255) aaGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATccc > 3:290601/1‑149 (MQ=255) cTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTc < 6:300385/149‑1 (MQ=255) gTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTc > 8:162251/1‑147 (MQ=255) gTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTc < 7:162251/147‑1 (MQ=255) cGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGaaa > 8:146835/1‑148 (MQ=255) gagaTGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGaaaaa < 2:143244/149‑1 (MQ=255) gaTGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAgg < 8:76720/149‑1 (MQ=255) tGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGAt < 2:249487/149‑1 (MQ=255) tGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGAt > 7:235922/1‑149 (MQ=255) aaaGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTTGGCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCACGTGGCATGCGTTCGATCATCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATg > 1:63293/1‑148 (MQ=255) gCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGAGGTCAg > 8:52637/1‑148 (MQ=255) tCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGaaaaa > 4:13293/1‑136 (MQ=255) tCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGaaaaa < 3:13293/136‑1 (MQ=255) aCCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATg > 6:304224/1‑117 (MQ=255) ccTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGAt > 7:15540/1‑136 (MQ=255) ccTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGAt < 8:15540/136‑1 (MQ=255) ccTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggtgg < 8:235922/149‑1 (MQ=255) gAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTa < 8:183025/148‑1 (MQ=255) ttCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATcga > 2:11316/1‑149 (MQ=255) cGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCg > 5:5936/1‑149 (MQ=255) gATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGt < 2:266395/149‑1 (MQ=255) ttGCGCTCCAGGGCCTT‑GCGTGCAA‑CGGCCTTGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGt > 3:106943/2‑148 (MQ=38) aTGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGt > 1:120117/1‑148 (MQ=255) gcgcTCCAGGGCCTT‑GCGTGCAACGGCCTTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGa < 1:74409/87‑1 (MQ=21) gcgcTCCAGGGCCTT‑GCGTGCAACGGCCTTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGa > 2:74409/1‑87 (MQ=21) cgcTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCAtt < 2:34933/149‑1 (MQ=255) gcTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGAt > 1:8879/1‑115 (MQ=255) gcTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGAt < 2:8879/115‑1 (MQ=255) tCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggt > 4:279771/1‑124 (MQ=255) tCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggt < 3:279771/124‑1 (MQ=255) tCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAg > 3:261437/1‑122 (MQ=255) tCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAg < 4:261437/122‑1 (MQ=255) tCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAg > 1:243039/1‑149 (MQ=255) aaGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAggg > 7:116724/1‑149 (MQ=255) aaGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAggg > 4:3672/1‑149 (MQ=255) aaGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAg < 6:5936/147‑1 (MQ=255) ggCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCa > 2:5832/1‑149 (MQ=255) gCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCAc < 4:290601/149‑1 (MQ=255) aCGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAgg < 5:194610/110‑1 (MQ=255) aCGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAgg > 6:194610/1‑110 (MQ=255) | GCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGCAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGCGCTCAAGGCCGTT‑GCACGCAA‑GGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGGCAC > NC_002947/2630025‑2630308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |