| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,863,839 | C→T | 7.2% | P921L (CCA→CTA) | PP_3413 → | two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,863,839 | 0 | C | T | 7.2% | 203.9 / 4.4 | 69 | P921L (CCA→CTA) | PP_3413 | two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base C (32/32); new base T (2/3); total (34/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.22e-01 | |||||||||||
ACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTCAAGACCCACCTGCCCCAGGTGCGCCCTCAGCAGCCG > NC_002947/3863696‑3863987 | acTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCtggcag < 3:121276/149‑1 (MQ=255)acTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCAAGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCcagcag > 1:147852/1‑149 (MQ=255) gCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCg < 2:240103/149‑1 (MQ=255) gCGGAGAAGGGCGAGAGCGCCCTTGCACGCTGGCAGGAAGCGCGCGGCGACCTGGTGATCACCGATTGCAGCATGCCGGGCATGGACGGGCATTAACTCACCCGGCGCATTCCCAGCCGGGAGGGCGAGCGCGGCCTGCCAGCAGGcc < 6:242363/148‑1 (MQ=255) gagaATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCTGGCAGGCCgcgc < 7:43717/149‑4 (MQ=255) aaTGGCGAGCTCGCCCTTGCACGATGGCATGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCt < 6:288974/149‑1 (MQ=255) tGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTg > 1:203643/1‑149 (MQ=255) tGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTg > 1:225953/1‑149 (MQ=255) ggCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTgg > 4:174363/1‑149 (MQ=255) gCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTgg < 5:38555/148‑1 (MQ=255) gCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGc > 1:264809/1‑149 (MQ=255) gaTCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGa > 6:221432/1‑149 (MQ=255) aTCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGAc < 3:40556/149‑1 (MQ=255) gCCCTTGCACGCTGGCTGGAAGGGCGCTGCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGc < 2:147852/149‑1 (MQ=255) gCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGc > 6:193088/1‑149 (MQ=255) cccTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCg < 8:257882/147‑1 (MQ=255) cccTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCg > 7:257882/1‑147 (MQ=255) cccTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGc > 3:186118/1‑148 (MQ=255) aCGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGcc > 8:89162/1‑148 (MQ=255) cGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCa < 2:225953/149‑1 (MQ=255) gCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGc < 3:283349/127‑1 (MQ=255) gCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGc > 4:283349/1‑127 (MQ=255) aGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGTGc < 5:44837/149‑1 (MQ=255) aGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGc < 4:52962/149‑1 (MQ=255) gcgcTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTa > 5:25432/1‑149 (MQ=255) gcTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACt < 4:173674/149‑1 (MQ=255) aCCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGc < 6:25432/149‑1 (MQ=255) aCCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGc < 5:158341/149‑1 (MQ=255) ccTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGcc > 4:265711/1‑149 (MQ=255) ccTGGTGATCACAGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGcc > 8:87031/1‑149 (MQ=255) cTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCt < 1:114860/149‑1 (MQ=255) tGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTg > 6:5860/1‑149 (MQ=255) gTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTg < 5:221432/147‑1 (MQ=255) gATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGc > 3:62086/1‑147 (MQ=255) aCCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCgg > 5:302647/1‑149 (MQ=255) aCCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCg < 5:193088/148‑1 (MQ=255) aTTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATg > 3:58800/1‑149 (MQ=255) tGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCTGGCAGGCCgcg > 4:271245/1‑83 (MQ=255) tGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCTGGCAGGCCgcg < 3:271245/85‑3 (MQ=255) gttcaTGCCCGTCCATGACCGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGAc > 1:19347/4‑148 (MQ=255) tGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGc < 5:5860/149‑1 (MQ=255) gCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGcc > 5:140187/1‑149 (MQ=255) cctgTCATGTACGGGCATGAACTCACCCGGCGCATTGGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGcc < 7:78348/145‑1 (MQ=255) ccGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCt < 7:89162/149‑1 (MQ=255) tCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGc > 5:178570/1‑143 (MQ=255) tCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGc < 6:178570/143‑1 (MQ=255) tCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGtt > 1:159718/1‑148 (MQ=255) tGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAg < 6:302647/149‑1 (MQ=255) ggACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGGGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGc > 2:136912/1‑149 (MQ=255) gACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGc < 2:264809/148‑1 (MQ=255) cGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGa > 1:292307/1‑149 (MQ=255) gggCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGAt > 5:1644/1‑149 (MQ=255) gCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTg < 2:42868/149‑1 (MQ=255) gCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCATGCCAGCAGCCCGTATTCTTGGCGTGACCGCCAAAGCCCAGGCCGAGGAGCGTACTCGCTGACAGGCCAGCGGCATGGACCAATGCCTGTTCAACCCGATTg > 1:275101/1‑149 (MQ=255) aCTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTgc < 4:62086/149‑1 (MQ=255) tCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTgcg > 2:28351/1‑148 (MQ=255) cACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCa > 8:224079/1‑149 (MQ=255) aCCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCAc > 3:140435/1‑149 (MQ=255) aCCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCAc < 2:19347/149‑1 (MQ=255) aCCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCAc > 5:66376/1‑149 (MQ=255) ccGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGc < 7:224079/149‑1 (MQ=255) gcATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCTAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTc > 7:59219/1‑146 (MQ=255) cATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTCAAGa < 4:140435/149‑1 (MQ=255) cAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTCAAGACCCAcc > 8:129266/1‑149 (MQ=255) ccTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCt > 3:253258/1‑108 (MQ=255) ccTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCt < 4:253258/108‑1 (MQ=255) gAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTCAAGACCCACCTGcccc < 3:174363/148‑1 (MQ=255) gggCGAGCGCGGCCTGCTAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTCAAGACCCACCTGCCCCAgg < 8:59219/149‑1 (MQ=255) aGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTCAAGACCCACCTGCCCCAGGTgcgc > 2:304545/1‑149 (MQ=255) cgcgGCCTGCCAGCAGGCCGTAGTCTTGGCGTGACCGCCAATGCCGAGGCCGAGGAGGGTACTCGCTGCCTTGCCAGCTGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTTCTCACTCTCAAGACCCTCCTGCCCCAGGTtcgtg < 8:278452/148‑3 (MQ=255) cTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTCAAGACCCACCTGCCCCAGGTGCGCCCTcagca < 4:58800/149‑1 (MQ=255) ccAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTCAAGACCCACCTGCCCCAGGTGCGCCCTCAGCAGcc < 6:140187/149‑1 (MQ=255) cagcagGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTCAAGACCCACCTGCCCCAGGTGCGCCCTCAGCAGCCg > 6:439/1‑149 (MQ=255) cagcagGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTCAAGACCCACCTGCCCCAGGTGCGCCCTCAGCAGCCg > 1:44887/1‑149 (MQ=255) | ACTGGCGGAGAATGGCGAGATCGCCCTTGCACGCTGGCAGGAAGCGCGCTTCGACCTGGTGATCACCGATTGCAGCATGCCGGTCATGGACGGGCATGAACTCACCCGGCGCATTCGCAGCCTGGAGGGCGAGCGCGGCCTGCCAGCAGGCCGTATTCTTGGCGTGACCGCCAATGCCCAGGCCGAGGAGCGTACTCGCTGCCTGGCCAGCGGCATGGACGAATGCCTGTTCAAGCCGATTGGTCTGCGCACGCTCAAGACCCACCTGCCCCAGGTGCGCCCTCAGCAGCCG > NC_002947/3863696‑3863987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |