Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,119,481 | T→G | 6.8% | V724G (GTG→GGG) | PP_3622 → | isoquinoline 1‑oxidoreductase subunit beta |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,119,481 | 0 | T | G | 6.8% | 169.1 / 2.4 | 56 | V724G (GTG→GGG) | PP_3622 | isoquinoline 1‑oxidoreductase subunit beta |
Reads supporting (aligned to +/- strand): ref base T (22/30); new base G (2/2); total (24/32) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 |
AAGCGGTGTACGTGGATGGCAAGCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGACCCATCGTTTCGCAAGAACCGCTGGCTGGCTGGCGCTGCC > NC_002947/4119334‑4119628 | aagCGGTGTACGTGGATGGCAAGCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCTCAT‑CATCGAAAGCCGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGt < 1:218571/149‑1 (MQ=255) agCGGTGTACGTGGATGGCAAGCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTTCCCGCCGTgg < 4:134671/149‑1 (MQ=255) gCGGTGTACGTGGATGGCAAGCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTgg > 8:119223/1‑148 (MQ=255) gCGGTGTACGTGGATGGCAAGCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTgg < 7:119223/148‑1 (MQ=255) gCGGTGTACGTGGATGGCAAGCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGc > 4:188110/1‑149 (MQ=255) tGGATGGCAAGCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTg < 3:188110/149‑1 (MQ=255) ggATGGCAAGCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTgg > 7:223195/1‑149 (MQ=255) gATGGCAAGCCGCGCGCTCGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGc < 7:20513/149‑1 (MQ=255) cAAGCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAAcg > 1:96781/1‑149 (MQ=255) gCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCgg > 6:118194/1‑149 (MQ=255) gCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGGGGCCAcggcgggca < 1:166912/140‑4 (MQ=255) gCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGGGGCCAcggcgggca > 2:166912/1‑137 (MQ=255) ccGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGt > 7:5936/1‑149 (MQ=255) cgcgcgCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTc < 8:5936/149‑1 (MQ=255) aaTTACGACCTGTACCCGATCCTGGCGCCTTCGCGGCTGGCGCGGGTGCATGTGCGCAG‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCAc < 6:216735/149‑1 (MQ=255) aaTTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCAc > 7:9343/1‑149 (MQ=255) ttACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTg < 3:286759/149‑1 (MQ=255) ttACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTg < 3:203473/149‑1 (MQ=255) gACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGGGGCCAcggcggg < 6:33992/119‑2 (MQ=255) gACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGGGGCCAcggcggg > 5:33992/1‑118 (MQ=255) ccTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTgg > 8:278605/1‑119 (MQ=255) ccTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTgg < 7:278605/119‑1 (MQ=255) tACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCa > 2:67416/1‑136 (MQ=255) tACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCACTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCa < 1:67416/136‑1 (MQ=255) cccGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTcgc > 4:6662/1‑126 (MQ=255) cccGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTcgc < 3:6662/126‑1 (MQ=255) cccGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTgc < 6:275929/149‑1 (MQ=255) cccGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTg < 8:175322/148‑1 (MQ=255) ccGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAg > 7:239349/1‑129 (MQ=255) ccGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAg > 7:238454/1‑129 (MQ=255) ccGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAg < 8:238454/129‑1 (MQ=255) ccGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAg < 8:239349/129‑1 (MQ=255) ccGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTgcg < 1:9590/149‑1 (MQ=255) gATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTgcg > 5:145619/1‑147 (MQ=255) tGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTg > 3:121012/1‑149 (MQ=255) tCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAg > 7:15901/1‑149 (MQ=255) cgcgGATGGCGCGGGTGCATGTGCGCATGCATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACt > 1:175217/1‑120 (MQ=255) ggATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAgccgc < 6:69986/149‑1 (MQ=255) gcgcGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCacac < 3:178726/149‑1 (MQ=255) gcgGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGcc > 4:25013/1‑132 (MQ=255) gcgGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGcc < 3:25013/132‑1 (MQ=255) cgGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCtt < 6:145619/149‑1 (MQ=255) gggTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTc < 4:121012/149‑1 (MQ=255) at‑catcGAAAG‑CGGGGCGAAGCTGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCACCGCGTGCGCAGGTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACaa < 2:96781/149‑1 (MQ=255) tcGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCtt < 1:37363/130‑1 (MQ=255) tcGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCtt > 2:37363/1‑130 (MQ=255) cGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGAc > 7:224753/1‑149 (MQ=255) ggCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGa < 8:15901/149‑1 (MQ=255) gAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGAcc > 1:68543/1‑148 (MQ=255) aGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGACCCa > 4:10089/1‑148 (MQ=255) gcggcATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGACCCATCGTTTc < 8:224753/149‑1 (MQ=255) gcggcATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGACCCATCGTTTc < 7:270652/149‑1 (MQ=255) gcggcATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGACCCATCGTTTc < 8:9343/149‑1 (MQ=255) ggcATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGACCCATCGTTTCGc < 8:223195/149‑1 (MQ=255) gAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGACCCATCGTTTCGCAAGAACCgc > 2:211801/1‑149 (MQ=255) accaccGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGACCCATCGTTTCGCAAGAACCgctg < 7:158097/149‑1 (MQ=255) gTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGACCCATCGTTTCGCAAGAACCGCTGGCTGGCTGGCGCTGcc < 5:118194/149‑1 (MQ=255) | AAGCGGTGTACGTGGATGGCAAGCCGCGCGCACGCAATTACGACCTGTACCCGATCCTGCCGCCTTCGCGGATGGCGCGGGTGCATGTGCGCAT‑CATCGAAAG‑CGGGGCGAAGATGGGCGGCATCGGCGAACCACCGCTGCCCGCCGTGGCCCCGGCGGTGGCCAACGCGGTCGCGCAGCTCACTGGCCAGCGCGTGCGCAGTTTGCCATTGAGCCGCCACACCTTCAGCTGATCGCACAAGGGACGCCTCATGACCCATCGTTTCGCAAGAACCGCTGGCTGGCTGGCGCTGCC > NC_002947/4119334‑4119628 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |