| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,338,494 | A→T | 9.2% | intergenic (+114/+28) | PP_3812 → / ← PP_5632 | lipase/allo‑isoleucine metabolism protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,338,494 | 0 | A | T | 9.2% | 194.2 / 9.2 | 76 | intergenic (+114/+28) | PP_3812/PP_5632 | lipase/allo‑isoleucine metabolism protein |
| Reads supporting (aligned to +/- strand): ref base A (26/42); new base T (5/2); total (31/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.88e-01 | |||||||||||
CGGGCAACGAACTTAAAGTGCATCT‑GCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCG > NC_002947/4338349‑4338639 | cGGGCAACGAACTTAAAGTGCATCTGGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAAc > 1:2876/1‑149 (MQ=255) gggCAACGAACTTAAAGTGCATCT‑GCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAAccc > 6:283740/1‑149 (MQ=255) gCAACGAACTTAAAGTGCATCT‑GCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCcgc < 7:227255/149‑1 (MQ=255) aaCGAACTTAAAGTGCATCT‑GCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCcgcg > 8:229801/1‑148 (MQ=255) aaCGAACTTAAAGTGCATCT‑GCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCcgcg > 1:78896/1‑148 (MQ=255) cGAACTTAAAGTGCATCT‑GCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGaaa < 3:273629/149‑1 (MQ=255) aaCTTAAAGTGCATCT‑GCAGTGAGGCGATGAGCAAAAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCATTAGCGGGTAAACCCGCGAAAgg > 2:281649/1‑149 (MQ=255) aaGTGCATCT‑GCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCgg < 4:228384/148‑1 (MQ=255) cATCT‑GCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATc > 1:36277/1‑149 (MQ=255) aTCT‑GCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCGTTAGCGGGGAAAACAGCGAAAGGGACgggcaata > 8:180185/1‑142 (MQ=255) aTCT‑GCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCATTAACCGGTAAACCCCCCAAAAGGCCCGCaaaac > 8:110566/1‑146 (MQ=255) agtccggCTATCAGCAATAGCCCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACACCCCGCCGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCTAAAGGGCCgg < 6:249046/131‑1 (MQ=255) gCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAAccc < 2:247296/148‑1 (MQ=255) ccAATAGACCTGCGGGGGGGGTTATTTTGCTTATATTTGCCCAACCCGCCGGCAGGTTTCATTGAACCCGCCCGGGGGGCGGCTGGGCCGGCCCTTCCGGGGGTAAACCCGCTAATGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCt < 2:278712/148‑1 (MQ=255) cAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCtt < 8:205328/149‑1 (MQ=255) cAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCtt < 2:36277/149‑1 (MQ=255) cAATAGACCCACCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCGCAAACCCtt > 2:30236/1‑149 (MQ=255) aTAGACCCGCCTGGGCGGGTCTTTCGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCATTAGCGGGTAAAACCGCGAAAGGGCCGGAAAATCCAGCTACGGGCTCAAACCCATc > 8:43670/1‑148 (MQ=255) tAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCca < 5:222610/149‑1 (MQ=255) gACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCATTCGCGGGTTAACCCGCGAAAGGGCCCGCAAATCCAGCTCAGGGCTCAAACCCTTCcac > 2:67764/1‑148 (MQ=255) ccGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCGTTAGCCGGGTAACCAGGCCAAGGGCCGGCAAATAATGCTAACGGGGCAAACCCATcaacaaa > 3:288062/1‑147 (MQ=255) ccGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCATTAGCGGGGTAACCCGCGGAAGGGCCGGGAAATACGGCTCAGGGGGGAAACCCATGCCCAAtt > 5:31962/1‑148 (MQ=255) cTGGGCGGGTCTTTTGCTTATATTTGCGCAAACTCCCCGCCGGCTTCAATTATTCTCCCAGCGGTGCGGCTGGTCCGGCCCTTTCGCGGTAAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCa < 4:299768/149‑1 (MQ=255) tCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAAAG‑ATAACCACAACCt > 4:102414/1‑149 (MQ=255) tttGCTTCTTTTTGCGGAAACAGCCCGCAGGATTCATTGAATCTGCCTGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTc < 6:31962/148‑1 (MQ=255) ttGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTc < 5:283740/147‑1 (MQ=255) ttCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAg < 6:196462/87‑1 (MQ=255) ttCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAg > 5:196462/1‑87 (MQ=255) aTTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑tt > 1:22195/1‑149 (MQ=255) tttGCGGAAACCGCCCGCAGGCTTCAATGAATCTGCCAGCGCTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTg < 5:265784/149‑1 (MQ=255) tGCGTAAACAGCCCGCAGGCTTCAATGAATCTGCCTGCGGTGGGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTgg < 1:281649/148‑1 (MQ=255) gAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATg > 5:171117/1‑117 (MQ=255) gAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATg < 6:171117/117‑1 (MQ=255) atcAGCCCGCAGGATTCAATGAATCTGCCTGCGGTGCGGCAGGTCCGGCCCTTTCGGGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGc < 7:110566/147‑1 (MQ=255) aGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTg > 5:79502/1‑148 (MQ=255) aGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTg > 7:63783/1‑148 (MQ=255) aGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGc < 8:63783/149‑1 (MQ=255) aGCCCGCAGGCTTAAATTAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATGAATCACCTCAGCCTTCGCCACCCC‑tt < 7:192485/138‑1 (MQ=255) ccGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATg > 5:160214/1‑149 (MQ=255) gCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGACCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGcc < 2:91574/149‑1 (MQ=255) tttCAATCAATCTGCCCGGGGTGGGGCTGGGCCGGCCGTTTCGGGGTTAACCCCGCTAATGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTg < 6:53435/148‑1 (MQ=255) cgtCAATGAAAGTGCCTGCGGGGCGGCAGGGCCGGCCCTTCCGCGGGTAACCCCGCTAATGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTg < 6:208920/147‑1 (MQ=255) cTTCACTGACTCTGCCAGCGGTGCGGCAGGTCCGGCCCTTGCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTg < 8:204542/149‑1 (MQ=255) cAATGAATCTGCCAGCGGTGCGGCAGTTCCGGCCCTTTGGCGGGTAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTgg < 4:288062/147‑1 (MQ=255) cAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTgg < 1:182687/147‑1 (MQ=255) cAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGt < 2:67835/148‑1 (MQ=255) aTGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATc > 5:256903/1‑100 (MQ=255) aTGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATc < 6:256903/100‑1 (MQ=255) aTCTGCCTGCGGTGCGGCTGGTCCGGCCCTTTCGCGGTTAACCCGGCTAATGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAgcg < 6:44095/148‑1 (MQ=255) aTCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCa < 3:198696/131‑1 (MQ=255) aTCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCa > 4:198696/1‑131 (MQ=255) ccAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGa < 3:102414/147‑1 (MQ=255) gggtcGGCAGGTCCGGCCCTTTCGCGGGTACACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTaa < 3:82505/145‑1 (MQ=255) tGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACa < 2:78896/149‑1 (MQ=255) ggCATGTGCGGGCCTTTCCGCGGTAAACCCGCGAAAGGGCCGGGAAATCCTGCTCATGGCTCAAACCCTTCCACAATT‑ATCACCTCATGCTTGCCCACCCCTTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAgg < 1:67764/149‑1 (MQ=255) ggCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGc < 6:79502/149‑1 (MQ=255) cAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCgg < 6:291669/139‑1 (MQ=255) cAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCgg > 5:291669/1‑139 (MQ=255) aGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGAc > 6:242763/1‑149 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCt < 3:28057/149‑1 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCt > 4:46376/1‑149 (MQ=255) ccTTTCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTgcgc > 4:160260/1‑149 (MQ=255) ccTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTgcgc < 7:180185/149‑1 (MQ=255) cTTTCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGcgcg > 5:235379/1‑149 (MQ=255) tttCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCctc < 6:248699/108‑1 (MQ=255) tttCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTgcgc < 4:51138/147‑1 (MQ=255) tttCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTgcgc > 3:51138/1‑147 (MQ=255) tttCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGcgcg > 2:209400/1‑148 (MQ=255) tttCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCGTGGTACAGCGCGGAGCGGTAACAGGCGCCGGCCTGcgcg > 2:223346/1‑148 (MQ=255) tCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGt < 7:270799/147‑1 (MQ=255) tCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTa < 7:229801/148‑1 (MQ=255) cgcgGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTAc < 2:22195/148‑1 (MQ=255) cccgGGCAACCCCGCGAACGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTAc < 5:161892/146‑1 (MQ=255) gcgGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGa < 3:46376/149‑1 (MQ=255) tggTAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAAt < 1:108158/148‑1 (MQ=255) tAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCg > 8:43731/1‑148 (MQ=255) | CGGGCAACGAACTTAAAGTGCATCT‑GCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCACAATG‑ATCACCTCAGCCTTCGCCACCCC‑TTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCG > NC_002947/4338349‑4338639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |