| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,654,891 | T→C | 9.0% | intergenic (+43/‑215) | aceA → / → PP_4118 | isocitrate lyase/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,654,891 | 0 | T | C | 9.0% | 215.6 / 9.7 | 78 | intergenic (+43/‑215) | aceA/PP_4118 | isocitrate lyase/membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (34/37); new base C (5/2); total (39/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.41e-01 | |||||||||||
CTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAG > NC_002947/4654761‑4655036 | cTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGGCCCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTa < 1:40867/149‑1 (MQ=255)cTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGttttt < 2:6582/147‑1 (MQ=255) ttCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACAGGAAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTa > 1:256584/1‑149 (MQ=255) ttCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTAcc > 7:285129/1‑149 (MQ=255) acATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCCGGCCTTTGTTTTTACCCgaga > 2:305763/1‑147 (MQ=255) aTGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgg > 1:305711/1‑149 (MQ=255) aTGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgg > 4:199985/1‑149 (MQ=255) gACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggc > 6:56727/1‑149 (MQ=255) ccaccGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑ACCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggccg > 7:53933/1‑149 (MQ=255) caccGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggccgg > 8:264214/1‑149 (MQ=255) caccGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAgggccgg > 4:275803/1‑149 (MQ=255) aTCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCctgct < 5:211986/149‑1 (MQ=255) tCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCctgctg < 5:123637/149‑1 (MQ=255) ccAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTgg > 7:165200/1‑149 (MQ=255) cTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTAc < 2:149196/149‑1 (MQ=255) ttCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTAc > 1:257635/1‑148 (MQ=255) gtcgGTGACTGCACTGACCTGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAg < 1:305763/148‑1 (MQ=255) gtcgGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGc < 2:305711/149‑1 (MQ=255) tcgGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGcc > 1:248036/1‑149 (MQ=255) cgGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCg > 1:270105/1‑149 (MQ=255) aCTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCa < 4:184937/148‑1 (MQ=255) aCTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCAc > 1:5162/1‑149 (MQ=255) cTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCAcc < 2:248036/149‑1 (MQ=255) cACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCAcc < 7:220247/146‑1 (MQ=255) cACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCAcc > 8:220247/1‑146 (MQ=255) cACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGtt < 3:275803/149‑1 (MQ=255) aCTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGttt > 4:299004/1‑149 (MQ=255) aCTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGttt > 6:222537/1‑149 (MQ=255) aCTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGtt > 4:132327/1‑148 (MQ=255) cGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTAc < 3:132327/148‑1 (MQ=255) gACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTAcc < 2:256584/148‑1 (MQ=255) ccGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTa < 5:26301/144‑1 (MQ=255) ccGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTa > 6:26301/1‑144 (MQ=255) gaagaGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGTGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACAGTATTcgc < 2:257635/149‑1 (MQ=255) agagCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTc > 8:76779/1‑121 (MQ=255) agagCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTc < 7:76779/121‑1 (MQ=255) agagCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCgg < 5:56727/149‑1 (MQ=255) agagCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCgg < 3:199985/149‑1 (MQ=255) gCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGt > 1:236101/1‑148 (MQ=255) gTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTcgc > 3:278871/1‑141 (MQ=255) gTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTcgc < 4:278871/141‑1 (MQ=255) cACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGc < 3:299004/149‑1 (MQ=255) tGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAg > 7:182291/1‑102 (MQ=255) tGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAg < 8:182291/102‑1 (MQ=255) tGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACt < 6:312120/149‑1 (MQ=255) ttGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATc < 8:165200/149‑1 (MQ=255) ttGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATc < 5:52947/149‑1 (MQ=255) ccGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATc > 4:221263/1‑146 (MQ=255) ccGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATc < 3:221263/146‑1 (MQ=255) cGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGgga < 7:264214/149‑1 (MQ=255) cGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGgga < 2:5162/149‑1 (MQ=255) cGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGgga < 8:285129/149‑1 (MQ=255) gTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGTTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggag > 7:62064/1‑149 (MQ=255) gTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCCCCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggag > 8:181362/1‑149 (MQ=255) gTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggag > 1:266138/1‑149 (MQ=255) gAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggagga < 2:236101/148‑1 (MQ=255) aaaCA‑‑AAGG‑CCCGGAGCTTTCACAAGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggag > 1:206656/2‑146 (MQ=21) aaaCA‑‑AAGG‑CCCGGAGCTTTCACAAGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGggag > 4:272079/2‑146 (MQ=21) aaCA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGgaga < 5:222537/149‑1 (MQ=255) aaCA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGgaga < 2:266138/149‑1 (MQ=255) aaCA‑‑AAGG‑CCCGGAGCTTTCACAAGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGc > 3:293582/1‑84 (MQ=21) aaCA‑‑AAGG‑CCCGGAGCTTTCACAAGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGc < 4:293582/84‑1 (MQ=21) aaCA‑‑AAGG‑CCCGGAGCTTTCACAAGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGgaga > 1:291443/1‑149 (MQ=21) aCA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGac < 8:53933/149‑1 (MQ=255) cA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTa < 4:207454/130‑1 (MQ=255) cA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTa > 3:207454/1‑130 (MQ=255) cA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGaca < 2:51051/149‑1 (MQ=255) cA‑‑AAGG‑CCCGGAGCTTTCACAAGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGaca > 4:8366/1‑149 (MQ=21) aGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCgg < 2:181367/137‑1 (MQ=255) aGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCgg > 1:181367/1‑137 (MQ=255) g‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACAt > 7:157210/1‑149 (MQ=255) cccGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCCGCCGTTCACCGTTTCCGCCGCTACAGTATTCGCGGGTAAACCCGCACCTACAATGATCGGGAGGAGACACACATc > 4:228580/1‑149 (MQ=255) gggCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGc > 6:23644/1‑148 (MQ=255) ttGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTg > 7:109440/1‑149 (MQ=255) tgAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGa > 2:293953/1‑143 (MQ=255) tgAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGa < 1:293953/143‑1 (MQ=255) tgAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTggg < 8:109440/148‑1 (MQ=255) aGCCCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAg < 3:8366/149‑1 (MQ=255) | CTTCGACGACATGACCACCGTGATCCAGGGCGGCGCTTCGTCGGTGACTGCACTGACCGGTTCGACCGAAGAAGAGCAGTTCCACTGATAGTGGGTTGCCGTTGAACA‑‑AAGG‑CCCGGGGCTTGTGAAAGCTCCGGGCCTTTGTTTTTACCCGAGAAAGGGCCGGGCCTGCTGGCCAATTTTTACCAGCCGTTCACCGTTTCCGCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAG > NC_002947/4654761‑4655036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |