| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,458,898 | Δ1 bp | 6.1% | intergenic (+23/‑39) | leuS → / → PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,458,898 | 0 | T | . | 6.1% | 259.6 / 10.4 | 82 | intergenic (+23/‑39) | leuS/PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (34/43); new base . (3/2); total (37/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.33e-01 | |||||||||||
CCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATGGAC > NC_002947/5458751‑5459044 | ccAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGAtt < 2:201650/149‑1 (MQ=255) ccGCGAAGAAGTCGAAGCCGGTGGCCGCAGCAACGAGAATGTCCTGCGCTTCTTCGATGGCCTGACCATCCGCAAGGTCATCGTGTTACC‑GGGCAAGCTGTTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCgg < 5:18609/149‑1 (MQ=255) cgcgAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTGCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCggg < 5:313279/149‑1 (MQ=255) cgcgAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCggg < 7:258552/149‑1 (MQ=255) gcgAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGCAATCGA‑TGCGGGt > 3:142534/1‑149 (MQ=255) gaagaaGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGCAATCGA‑TGCGGGTgg < 4:142534/149‑1 (MQ=255) agaagTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGc > 3:341030/1‑149 (MQ=255) aagTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCg > 2:273665/1‑148 (MQ=255) gTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGCAATCGA‑TGCGGGTgg > 3:282849/1‑143 (MQ=255) gTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGCAATCGA‑TGCGGGTgg < 4:282849/143‑1 (MQ=255) cGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACCTCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGaa > 3:249175/1‑147 (MQ=255) cGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGaa > 3:244329/1‑147 (MQ=255) aaGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAgg < 8:184033/149‑1 (MQ=255) ccGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGccc < 7:76477/149‑1 (MQ=255) gCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCa > 8:79613/1‑148 (MQ=255) cccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCaaaa > 7:165000/1‑147 (MQ=255) cccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCaaaa < 7:79613/147‑1 (MQ=255) cccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCaaaa < 8:165000/147‑1 (MQ=255) cGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGa < 2:22859/149‑1 (MQ=255) cGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGa < 3:311298/149‑1 (MQ=255) cGCAGCAACGAGAATGTCCTGCGCTTCATCGAGGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGa < 2:331575/149‑1 (MQ=255) gcagcaACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAgg > 4:311298/1‑146 (MQ=255) caACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGcaa > 2:283077/1‑148 (MQ=255) cTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAg < 3:248384/128‑1 (MQ=255) cTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAg > 4:248384/1‑128 (MQ=255) cTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAAc < 4:341030/149‑1 (MQ=255) gcTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCaa < 8:289876/149‑1 (MQ=255) gcTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCaa > 7:137215/1‑149 (MQ=255) cATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAATCGCCCTCCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAg < 5:106785/124‑1 (MQ=255) cATCGATCGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGCCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTCGCCGGAACAGGCCCAAAAGGGAg > 6:106785/1‑124 (MQ=255) gATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGGCAACATCGTCGCCAACTGATGAAAACGCCCCCCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTgg < 7:4598/149‑1 (MQ=255) aTGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTgg > 1:231492/1‑149 (MQ=255) cTGACCATCCGCAAGGTCATGGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGc < 2:336208/115‑1 (MQ=255) cTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCg > 3:171640/1‑149 (MQ=255) aTCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTgg < 4:102698/149‑1 (MQ=255) aTCCGCAAGGTAATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCGAACTGATGAAAACGCCCACCCGC‑ATCGTTTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTgg < 4:339369/149‑1 (MQ=255) gCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCA‑CCGC‑ATCGATTGTGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGt > 4:118865/1‑148 (MQ=255) cAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGt > 1:195272/1‑148 (MQ=255) aGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCAt < 3:65557/149‑1 (MQ=255) ggTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATg > 6:64463/1‑149 (MQ=255) gTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGCAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGc > 8:169701/1‑149 (MQ=255) tCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCt < 2:231492/149‑1 (MQ=255) tCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAg > 8:192478/1‑149 (MQ=255) tGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAgcgc < 5:64463/149‑1 (MQ=255) gTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCt < 1:283077/149‑1 (MQ=255) gTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGAACAAACGAAATTTGATGGTAAACGGCCTGGCggac > 2:304160/1‑134 (MQ=255) cc‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCg > 1:193420/1‑149 (MQ=255) ggCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTc < 3:233030/130‑1 (MQ=255) ggCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTc > 4:233030/1‑130 (MQ=255) ggCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGtt > 4:226284/1‑149 (MQ=255) aaGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTcc < 8:137215/149‑1 (MQ=255) aGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCa < 2:193420/149‑1 (MQ=255) aaCATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTgcgc < 7:119041/148‑1 (MQ=255) cATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCgg > 6:353052/1‑148 (MQ=255) aTCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCGAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCa > 5:186284/1‑149 (MQ=255) aTCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTACGGTTTCCAGCTGCGCGGCa > 3:335602/1‑149 (MQ=255) tcgCCAACTGATGAAAAAGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAAGAGGCCCAAAAGGGAGCAACAACATCATCAAACGCAATTTGCTGGTAATCGGACTGGCGGTCATGCTCAGCGACTGCGTTTTCCAGCTGCGCGGCACCgg > 6:194528/1‑149 (MQ=255) ccgCCAACTGATCAAAACGCCCACCCGC‑ATCGATGGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTc < 4:179416/131‑1 (MQ=255) gCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGc > 5:242477/1‑124 (MQ=255) gCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGc < 6:242477/124‑1 (MQ=255) gCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGgc < 3:226284/148‑1 (MQ=255) tgatgaAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCAcc > 6:9478/1‑148 (MQ=255) atgaAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGACCAGGCCCAAAGGGGAGCAACAACATGATCAAACGCAATTTGGTGGTAATCGGCCTGGCGGTCATGCTGAGCGCCTGCGGTTGCCAGCTGGGCGGCACCGGCGCCGCCGAg > 8:320990/1‑149 (MQ=255) atgaAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCAc > 5:70326/1‑136 (MQ=255) atgaAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCAc < 6:70326/136‑1 (MQ=255) atgaAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGa < 7:320990/148‑1 (MQ=255) atgaAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGa < 5:9478/148‑1 (MQ=255) aaaCGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTACGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGa < 4:335602/149‑1 (MQ=255) cccACCCGCAATCGA‑TGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGt > 7:199952/1‑148 (MQ=255) ccACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGc < 8:295332/106‑1 (MQ=255) ccACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGc > 7:295332/1‑106 (MQ=255) ccACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTcc > 1:59150/1‑113 (MQ=255) ccACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTcc < 2:59150/113‑1 (MQ=255) ccACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTg > 8:297451/1‑148 (MQ=255) cACCCGC‑ATCGATTGCGGGTGGGCGGAACAGTCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 4:244329/149‑1 (MQ=255) cACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCGAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 6:186284/149‑1 (MQ=255) cACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTTGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 4:249175/149‑1 (MQ=255) aCCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAg < 7:169701/149‑1 (MQ=255) ccGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAgg > 8:114877/1‑148 (MQ=255) c‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGTTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAAt < 2:195272/149‑1 (MQ=255) aTCGATTGTGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCCGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATg < 3:118865/149‑1 (MQ=255) tCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATgg < 4:171640/149‑1 (MQ=255) gATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATGGAc < 1:273665/149‑1 (MQ=255) | CCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACC‑GGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCGC‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATGGAC > NC_002947/5458751‑5459044 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |