| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,099,401 | Δ1 bp | 5.8% | coding (180/1470 nt) | PP_2709 → | long‑chain fatty acid‑‑CoA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,099,401 | 0 | G | . | 5.8% | 215.8 / 7.3 | 69 | coding (180/1470 nt) | PP_2709 | long‑chain fatty acid‑‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base G (28/36); new base . (2/2); total (30/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.33e-01 | |||||||||||
GTTGCGCCAGCACGCCGTGGAGCATCCTGACGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGACGGCGGTCGTGTGTGAG > NC_002947/3099254‑3099542 | gTTGCGCCAGCACGCCGTGGAGCATCCTGACGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTg > 6:179117/1‑148 (MQ=255)gTTGCGCCAGCACGCCGTGGAGCATCCTGACGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTg > 2:253264/1‑148 (MQ=255) ttGCGCCAGCACGCCGTGGAGCATCCTGACGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTg < 5:171220/147‑1 (MQ=255) gcCAGCACGCCGTGGAGCATCCTGACGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAAc < 1:182824/149‑1 (MQ=255) gcCAGCACGCCGTGGAGCATCCTGACGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCAGTGGTGCTGGATAAc > 8:281301/1‑149 (MQ=255) cGTGGAGCATCCTGACGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAg < 7:78608/149‑1 (MQ=255) tCCTGACGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCt > 4:162381/1‑149 (MQ=255) cTGACGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTgg < 2:25368/149‑1 (MQ=255) cTGACGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTg < 8:246935/148‑1 (MQ=255) aCGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTggg < 3:280243/147‑1 (MQ=255) cGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGAtt < 1:253264/149‑1 (MQ=255) ccGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTg < 8:98906/149‑1 (MQ=255) gTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTCCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCt > 8:220893/1‑149 (MQ=255) tCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGCGCTGCTAGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGt > 5:251658/1‑149 (MQ=255) ggCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGc > 1:222256/1‑149 (MQ=255) gCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGcc < 3:162381/149‑1 (MQ=255) gCGATGCGCAGAGTTACACCTCCCCGCAACTGCTCACCGCAGTCGAATCCCGTGCGAGCTGCCTGCGCAGCCACCCCCCGGGCACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGcc < 8:174320/149‑1 (MQ=255) cgcAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAAcgc < 5:224953/149‑1 (MQ=255) cgcAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAAcg < 5:15951/148‑1 (MQ=255) cGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGaa < 2:146254/141‑1 (MQ=255) cGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGaa > 1:146254/1‑141 (MQ=255) acacCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAgtgt < 3:8648/148‑1 (MQ=255) cacCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGa < 6:205352/149‑1 (MQ=255) acCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGa > 6:211451/1‑148 (MQ=255) cTACCGGCAACTGCTCAACGAAGTCAAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑Ag > 7:193581/1‑149 (MQ=255) tACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGt > 2:128256/1‑149 (MQ=255) gCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACgcgc < 1:75696/132‑1 (MQ=255) gCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACgcgc > 2:75696/1‑132 (MQ=255) aaCTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGtcgccg > 8:204138/1‑149 (MQ=255) cTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTggcgg > 7:168419/1‑109 (MQ=255) cTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTggcgg < 8:168419/109‑1 (MQ=255) gCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGtttt > 2:55461/1‑149 (MQ=255) cTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCTCAGCCAACCACCGGGAACCTTCGCCGTGGTTCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTTTTCGCCGaa < 7:249422/120‑1 (MQ=255) cTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGaa > 8:249422/1‑120 (MQ=255) cTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGttttt < 7:281301/149‑1 (MQ=255) aaCGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCa < 1:128256/148‑1 (MQ=255) aaCGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAg > 4:303406/1‑149 (MQ=255) aaCGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAg > 2:281311/1‑149 (MQ=255) cGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑a < 4:112973/130‑1 (MQ=255) cGAAGTCGAATACCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTAGCCGAACGCGCCAGTGTGAC‑a > 3:112973/1‑130 (MQ=255) atgcGATTCCCGTGCGAGCTTCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGa < 6:251658/146‑1 (MQ=255) tCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAAc > 1:147268/1‑111 (MQ=255) tCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAAc < 2:147268/111‑1 (MQ=255) tCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCT‑GATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGAcc > 5:5791/1‑148 (MQ=255) tCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCT‑GATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGAcc > 5:10911/1‑148 (MQ=255) gAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGAcc > 7:252517/1‑147 (MQ=255) tCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGtt < 2:222256/149‑1 (MQ=255) ccGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTc < 8:252517/148‑1 (MQ=255) gAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCa < 6:167764/147‑1 (MQ=255) gAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCa > 5:167764/1‑147 (MQ=255) gctgctTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGc > 5:139234/1‑149 (MQ=255) gctTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTg > 8:207789/1‑149 (MQ=255) ctTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTgc < 1:145103/149‑1 (MQ=255) cAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTgca < 2:152787/144‑1 (MQ=255) cAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTgca > 1:152787/1‑144 (MQ=255) aaCCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGa < 3:303406/149‑1 (MQ=255) accaccGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGACTAGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGa < 1:281311/149‑1 (MQ=255) accaccGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAg > 6:253734/1‑149 (MQ=255) accaccGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGAGGCGCTGTTCGCCGAACGCGCCAGAGTGAC‑AGTGCCGCCGTTTTTCACCGAGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAg > 7:126337/1‑149 (MQ=255) cGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGAcg > 5:171481/1‑149 (MQ=255) ggAACCTCCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGAcggc < 7:220893/149‑1 (MQ=255) cGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGACAGCGGTCgt < 6:139234/147‑1 (MQ=255) gCCGTGGTGCTTGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGACGGCGGTCgtgt < 5:179117/148‑1 (MQ=255) gCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCATCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGACGGCGGTCgtgt < 5:253734/148‑1 (MQ=255) cGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGttt < 4:31848/88‑1 (MQ=255) gtggtgCT‑GATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGACGGCGGTCGTGTGTGAg < 6:10911/149‑1 (MQ=255) gtggtgCT‑GATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGACGGCGGTCGTGTGTGAg < 6:5791/149‑1 (MQ=255) tggtgCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGACGGCGGTCGTGTGTGAg < 7:207789/149‑1 (MQ=255) cTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGAcggcgg > 3:318467/1‑133 (MQ=255) cTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGAcggcgg < 4:318467/133‑1 (MQ=255) tGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGACGGCGGTCgtgt < 6:101799/138‑1 (MQ=255) tGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGACGGCGGTCgtgt > 5:101799/1‑138 (MQ=255) | GTTGCGCCAGCACGCCGTGGAGCATCCTGACGCCGTGGCCGTTCAGGGCGATGCGCAGCGTTACACCTACCGGCAACTGCTCAACGAAGTCGAATCCCGTGCGAGCTGCTTGCGCAGCCAACCACCGGGAACCTTCGCCGTGGTGCTGGATAACGGGCCCGAAGCGCTATTCTGGGATTTGGCGGCGCTGTTCGCCGAACGCGCCAGTGTGAC‑AGTGCCGCCGTTTTTCAGCGCGACCCAGTTCCAGCACTGCTTGCAGCAAAGCGGAGTGACGGCGGTCGTGTGTGAG > NC_002947/3099254‑3099542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |