| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 612221 | NA (NA) | 10 (0.240) +GGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGA |
6/188 | NT | 12.6% | intergenic (+152/+65) | PP_0526/dxs | transposase/1‑deoxyxylulose‑5‑phosphate synthase |
| ? | NC_002947 | = 2436665 | 96 (1.690) | intergenic (+243/‑416) | PP_2134/fadB | transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase | |||||
GCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/612077‑612221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCTTTGT < NC_002947/2436665‑2436610 |||||||||||||||||||||||||||||||||||| GCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGG > 8:243290/1‑149GCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGG < 6:131374/149‑1 TGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCGGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGG > 1:295229/1‑148 TGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGG > 8:255894/1‑148 TGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCATCCGGCCATAGAAT‑CTCCTACGGGGG > 8:251085/1‑148 TGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTGGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGG > 5:327764/1‑148 CAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCAT > 2:261698/1‑149 CAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCA > 8:123771/1‑148 AACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CCGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATC > 2:5297/1‑149 ACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCC < 3:47074/149‑1 ACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCC < 2:219984/149‑1 GCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCTATAGAAT‑CTCCTACGGGGGCATCCAG < 1:194492/149‑1 CCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGATAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCACGCTG > 1:16804/1‑149 CCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTG < 7:123771/149‑1 CCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTG < 7:169375/149‑1 CCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTG > 8:193108/1‑149 CCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGATGAGAGAGCCCGATGGCGTTTTTACTGAAAAATTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTG > 5:97298/1‑149 CCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTGCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTG > 1:257094/1‑149 CGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGT < 5:63672/149‑1 GCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTC < 5:363800/149‑1 CAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAAT < 6:236387/149‑1 TGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATATAAT‑CTCCTACGGGGGAATCCAGGATGGTCAATCTGT > 4:139067/1‑148 ACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCTTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTC < 2:138390/148‑1 ACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTT < 6:109799/147‑1 ACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTT < 3:96150/147‑1 ACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGACCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCT < 1:339566/149‑1 CGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCT < 7:237195/148‑1 GGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACTATGACTCGTACCTAGAGGTTGCTGAGAGAGGACGATGGCGTTTTTAATGAAAATTTGCATCAGGCCTTAGAAT‑CTACTACGGGGGCATACAGGATGGTCAAAATGTTCTG > 8:21808/1‑148 GGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTG > 3:97659/1‑148 GCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAA < 7:243290/149‑1 GTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGA < 2:323555/149‑1 GTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACG > 5:59288/1‑148 TATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGA > 1:60642/1‑148 TCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAAT < 4:129643/132‑1 TCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAAT > 3:129643/1‑132 CCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACA > 6:252816/1‑147 CAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCCTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAA < 1:261698/149‑1 CAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAG > 3:284010/1‑149 AATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGTTGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGC > 7:203485/1‑149 AATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGC > 3:143027/1‑149 AATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGC > 1:227274/1‑149 TGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTC < 5:277335/133‑1 TGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTC > 6:277335/1‑133 CTGGGGAGAAATTCT‑CTGGCAAGCTGACTCTTACCTCGAGGTTGCTGATAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGC < 3:139067/148‑1 TTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGACTTGGCACCC > 8:28001/1‑149 ACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGAC < 6:115198/120‑1 ACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGAC > 5:115198/1‑120 CTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAG > 2:167728/1‑149 GAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTAGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAACCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCG < 7:21808/149‑1 GTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCC < 4:97659/148‑1 TTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGC < 1:167728/149‑1 AGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTACGGGGGCATCCAGGCTGGTCAATCTGTTCTGTAACGACAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCTTTGT < 7:28001/148‑1 |||||||||||||||||||||||||||||||||||| GCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCT‑CTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAAT‑CTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/612077‑612221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCTTTGT < NC_002947/2436665‑2436610 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |