| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 614774 = | 61 (1.080) | 4 (0.080) | 4/244 | NT | 6.6% | coding (473/888 nt) | ispA | farnesyl diphosphate synthase |
| ? | NC_002947 | 614838 = | 56 (1.050) | coding (409/888 nt) | ispA | farnesyl diphosphate synthase | |||||
GCCATCCTTGCTGGCGACGGTTTGCAGAGCCTGGCTTTCAGTGCCCTGCTCGACCCTTGCCTGAGCCCTCAGATCGACAGCATTCGCCTGGCCATGGTTCAGGTGCTGGCCAAAGCTGCCGGCCCGGCCGGCATGGTTGGCGGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/614922‑614774‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaggcGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCTTCGTCAAACGCCTTGTGGGTGGTCGGCTGGCCGCGACGCAGGTCGTCGTCGTCCA > NC_002947/614838‑614984 GCCATCCTTGCTGGCGACGGTTTGCAGAGCCTGGCTTTCAGTGCCCTGCTCGACCCTTGCCTGAGCCCTCAGATCGACAGCATTCGCCTGGCCATGGTTCAGGTGCTGGCCAAAGCTGCCGGCCCGGCCGGCATGGTTGGCGGCCAGGC > 5:223053/1‑149GCCATCCTTGCTGGCGACGGTTTGCAGAGCCTGGCTTTCAGTGCCCTGCTCGACCCTTGCCTGAGCCCTCAGATCGACAGCATTCGCCTGGCCATGGTTCAGGTGCTGGCCAAAGCTGCCGGCCCGGCCGGCATGGTTGGCGGCCAGGC > 6:310675/1‑149 CAGAGCCTGGCTTTCAGTGCCCTGCTCGACCCTTGCCTGAGCCCTCAGATCGACAGCATTCGCCTGGCCATGGTTCAGGTGCTGGCCAAAGCTGCCGGCCCGGCCGGCATGGTTGGCGG > 3:99215/1‑119 CAGAGCCTGGCTTTCAGTGCCCTGCTCGACCCTTGCCTGAGCCCTCAGATCGACAGCATTCGCCTGGCCATGGTTCAGGTGCTGGCCAAAGCTGCCGGCCCGGCCGGCATGGTTGGCGG < 4:99215/119‑1 CTTTCAGTGCCCTGCTCGACCCTTGCCTGAGCCCTCAGATCGACAGCATTCGCCTGGCCATGGTTCAGGTGCTGGCCAAAGCTGCCGGCCCGGCCGGCATGGTTGGCGGCC < 7:173967/111‑1 CTTTCAGTGCCCTGCTCGACCCTTGCCTGAGCCCTCAGATCGACAGCATTCGCCTGGCCATGGTTCAGGTGCTGGCCAAAGCTGCCGGCCCGGCCGGCATGGTTGGCGGCC > 8:173967/1‑111 GCCTGGCCATGGTTCAGGTGCTGGCCAAAGCTGCCGGCCCGGCCGGCATGGTTGACGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGC > 6:121392/1‑149 CTGGCCATGGTTCAGGTGCTGGCCAAAGCTGCCGGCCCGGCCGGCATGGTTGGCGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGG > 3:44890/1‑93 CTGGCCATGGTTCAGGTGCTGGCCAAAGCTGCCGGCCCGGCCGGCATGGTTGGCGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGG < 4:44890/93‑1 CAAAGCTGCCGGCCCGGCCGGCATGGTTGACGGCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCTTCGTCAAACGCCTTGTGG < 5:121392/149‑1 GCCAGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCTTCGTCAAACGCCTTGTGGGTGGTCGGCTGGCCGCGACGCAGGTCGTCGTC > 8:303492/1‑149 AGGCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCTTCGTCAAACGCCTTGTGGGTGGTCGGCTGGCCGCGACGCAGGTCGTCGTCGTC < 2:139886/149‑1 GCGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCTTCGTCAAACGCCTTGTGGGTGGTCGGCTGGCCGCGACGCAGGTCGTCGTCGTCCA > 7:317322/1‑149 GCCATCCTTGCTGGCGACGGTTTGCAGAGCCTGGCTTTCAGTGCCCTGCTCGACCCTTGCCTGAGCCCTCAGATCGACAGCATTCGCCTGGCCATGGTTCAGGTGCTGGCCAAAGCTGCCGGCCCGGCCGGCATGGTTGGCGGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/614922‑614774‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaggcGAATGCTGTCGATCTGAGGGCTCAGGCAAGGGTCGAGCAGGGCACTGAAAGCCAGGCTCTGCAAACCGTCGCCAGCAAGGATGGCGCACGCTTCGTCAAACGCCTTGTGGGTGGTCGGCTGGCCGCGACGCAGGTCGTCGTCGTCCA > NC_002947/614838‑614984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |