New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	776503 =	64 (1.130)	5 (0.090)	5/248	NT	7.4%	coding (609/966 nt)	PP_0668	transmembrane sensor
	?	NC_002947	776535 =	64 (1.180)					coding (641/966 nt)	PP_0668	transmembrane sensor

TCCGCCACCAACACACCGCGGCTCCAATCCTCGCGCAAGCGTTGTGCAGTTGATGGGGCGCCGACTTGCTGCGCGTCGAACACCATCATTTGCCCGGCTTGCAACGTGGTTTGTCTGCCGCTGCCGGAGCAAGTTGCCTGC‑AC‑TGCGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/776655‑776503 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcaGCGGCAGACAAACCACGTTGCAAGCCGGGCAAATGATGGTGTTCGACGCGCAGCAAGTCGGCGCCCCATCAACTGCACAACGCTTGCGCGAGGATTGGAGCCGCGGTGTGTTGGTGGCGGAGGACATGCCGCTGGTTCAGATGAT  >  NC_002947/776535‑776679                                                                                                                                                                                                                                                                                                              TCCGCCACCAACACACCGCGGCTCCAATCCTCGCGCAAGCGTTGTGCAGTTGATGGGGCGCCGACTTGCTGCGCGTCGAACACCATCATTTGCCCGGCTTGCAACGTGGTTTGTCTGCCGCTGCCGGAGCAAGTTGCCTGC‑AC‑TGCGCC                                                                                                                                                       >  4:106142/1‑149                        CCAATCCTCGCGCAAGCGTTGTGCAGTTGATGGGGCGCCGACTTGCTGCGCGTCGAACACCATCATTTGCCCGGCTTGCAACGTGGTTTGTCTGCCGCTGCCGGCGC‑AG‑TGCAGGCAACTTGCTCCGGCAGCGGCAGACAAACCACGTT                                                                                                                                >  5:102952/1‑149                          AATCCTCGCGCACGCGTGGTGCAGTTGATGGGCCGCCGACTTGCTGCGCGTCGAACACCATCATTTGCCCGGCTTGCAACGTGGTTTGTCTGCCGCTGCCGGCGC‑AG‑TGCAGGCAACTTGCTCCGGCAGCGGCAGACAAACCACGTTGC                                                                                                                              <  6:102952/149‑1                                                                                                                   CTGCCGCTGCCGGAGCAAGTTGCCTGC‑AC‑TGCGCCGGCAGCGGCAGACAAACCACGTTGCAAGCCGGGCAAATGATGGTGTTCGACGCGCAGCAAGTCGGCGCCCCATCAACTGCACAACGCTTGCGCGAGGATTG                                                  <  7:161280/136‑1                                                                                                                   CTGCCGCTGCCGGAGCAAGTTGCCTGC‑AC‑TGCGCCGGCAGCGGCAGACAAACCACGTTGCAAGCCGGGCAAATGATGGTGTTCGACGCGCAGCAAGTCGGCGCCCCATCAACTGCACAACGCTTGCGCGAGGATTG                                                  >  8:161280/1‑136                                                                                                                             CGGAGCAAGTTGCCTGC‑AC‑TGCGCCGGCAGCGGCAGACAAACCACGTTGCAAGCCGGCCAAATGATGGTGTTCGACGCGCAGCAAGTCGGCGCCCCATCAACTGCACAACGCTTGCGCGAGGATAGGAGCCGCGGTGTGTTGGTGGCG                            >  8:335165/1‑148                                                                                                                                                      CCGGCAGCGGCAGACAAACCACGTTGCAAGCCGGGCAAATGATGGTGTTCGACGCGCAGCAAGTCGGCGCCCCATCAACTGCACAACGCTTGCGCGAGGATTGGAGCCGCGGTGTGTTGGTGGCGGAGGACATGCCGCTGGTTC         <  7:290445/144‑1                                                                                                                                                      CCGGCAGCGGCAGACAAACCACGTTGCAAGCCGGGCAAATGATGGTGTTCGACGCGCAGCAAGTCGGCGCCCCATCAACTGCACAACGCTTGCGCGAGGATTGGAGCCGCGGTGTGTTGGTGGCGGAGGACATGCCGCTGGTTC         >  8:290445/1‑144                                                                                                                                                       CGGCAGCGGCAGACAAACCACGTTGCAAGCCGGGCAAATGATGGTGTTCGACGCGCAGCAAGTCGGCGCCCCATCAACTGCACAACGCTTGCGCGAGGATTGGAGCCGCGGTGTGTTGGTGGCGGAGGACATGCCGCTGGTTCAGATGA   >  1:23459/1‑149                                                                                                                                                        GGCAGCGGCAGACAAACCACGTTGCAAGCCGGGCAAATGATGGTGTTCGACGCGCAGCAAGTCGGCGCCCCATCAACTGCACAACGCTTGCGCGAGGATTGGAGCCGCGGTGTGTTGGTGGCGGAGGACATGCCGCTGGTTCAGATGAT  <  2:13215/149‑1                                                                                                                                                                                                                                                                                                              TCCGCCACCAACACACCGCGGCTCCAATCCTCGCGCAAGCGTTGTGCAGTTGATGGGGCGCCGACTTGCTGCGCGTCGAACACCATCATTTGCCCGGCTTGCAACGTGGTTTGTCTGCCGCTGCCGGAGCAAGTTGCCTGC‑AC‑TGCGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/776655‑776503 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcaGCGGCAGACAAACCACGTTGCAAGCCGGGCAAATGATGGTGTTCGACGCGCAGCAAGTCGGCGCCCCATCAACTGCACAACGCTTGCGCGAGGATTGGAGCCGCGGTGTGTTGGTGGCGGAGGACATGCCGCTGGTTCAGATGAT  >  NC_002947/776535‑776679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.