New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	804250 =	65 (1.150)	4 (0.080)	4/244	NT	6.4%	coding (308/462 nt)	PP_0692	hypothetical protein
	?	NC_002947	804292 =	57 (1.070)					coding (350/462 nt)	PP_0692	hypothetical protein

CGAGAAAACGCACCACCTGCATGGTCTTGAACACCAGCGAGGTGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/804297‑804250 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgttTTCTCGACAAGAAGCGCAATACGCTGGTGTACCTGGTGTACAGCGACCGCATGATCGAAGGCAGCCCGCAGAATGCGGTGACTGCCATTCCGATCCTGCCTTGGGCTCATTGATAGCCCGCTCCTGCATACGCATCGGTGGTTGGA  >  NC_002947/804292‑804437                                                                                                                                                                                                    CGAGAAAACGCACCACCTGCATGGTCTTGAACACCAGCGAGGTGCGTTTTCTCGACAAGAAGCGCAATACGCTGGTGTACCTGGTGTACAGCGACCGCATGATCGAAGGCAGCCCGCAGAATGCGGTGACTGCCATTCCGATCCTGCCT                                               >  1:252389/1‑149          GCACCACCTGCATGGTCTTGAACACCAGCGAGGTGCGTTTTCTCGACAAGAAGCGCAATACGCTGGTGTACCTGGTGTACAGCGACCGCATGATCGAAGGCAGCCCGCAGAATGCGGTGACTGCCATTCCGATCCTGCCTTGGGCTCAT                                      <  2:252389/149‑1          GCACCACCTGCATGGTCTTGAACACCAGCGAGGTGCGTTTTCTCGACAAGAAGCGCAATACGCTGGTGTACCTGGTGTACAGCGACCGCATGATCGAA                                                                                         <  7:243856/98‑1          GCACCACCTGCATGGTCTTGAACACCAGCGAGGTGCGTTTTCTCGACAAGAAGCGCAATACGCTGGTGTACCTGGTGTACAGCGACCGCATGATCGAA                                                                                         >  8:243856/1‑98                                            GCGTTTTCTCGACAAGAAGCGCAATACGCTGGTGTACCTGGTGTACAGCGACCGCATGATCGAAGGCAGCCCGCA                                                                              >  7:228525/1‑75                                            GCGTTTTCTCGACAAGAAGCGCAATACGCTGGTGTACCTGGTGTACAGCGACCGCATGATCGAAGGCAGCCCGCA                                                                              <  8:228525/75‑1                                              GTTTTCTCGACAAGAAGCGCAATACGCTGGTGTACCTGGTGTACAGCGACCGCATGATCGAAGGCAGCCCGCAGAATGCGGTGACTGCCATTCCGATCCTGCCTTGGGCTCATTGATAGCCCGCTCCTGCATACGCATCGGTGGTTGGA  <  6:32768/149‑1                                                                                                                                                                                                    CGAGAAAACGCACCACCTGCATGGTCTTGAACACCAGCGAGGTGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/804297‑804250 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgttTTCTCGACAAGAAGCGCAATACGCTGGTGTACCTGGTGTACAGCGACCGCATGATCGAAGGCAGCCCGCAGAATGCGGTGACTGCCATTCCGATCCTGCCTTGGGCTCATTGATAGCCCGCTCCTGCATACGCATCGGTGGTTGGA  >  NC_002947/804292‑804437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.