| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 810688 | 70 (1.240) | 4 (0.080) | 4/244 | NT | 5.5% | coding (383/456 nt) | rimI | ribosomal‑protein‑S18‑alanine N‑acetyltransferase |
| ? | NC_002947 | = 810709 | 71 (1.340) | coding (404/456 nt) | rimI | ribosomal‑protein‑S18‑alanine N‑acetyltransferase | |||||
AAACCAAGGCTGCGGCCTGGGCCTGCGCCTGCTCAAGCACCTGATGGCCCGGGCCTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/810533‑810688‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgccgGCAATCGGATAATAGTCGCGGCGGCGGCCAATTTCGTTGAAACCATAACGCTCGTACAAACGATAGGCCGACTGGTTGCTGGCGCGCACTTCCAGAAAGCATTCGCGGCCATTGAGCTGATAGGCCCGGGCCATCAGGTGCTT < NC_002947/810709‑810567 AAACCAAGGCTGCGGCCTGGGCCTGCGCCTGCTCAAGCACCTGATGGCCCGGGCCTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTG < 2:343120/149‑1AAACCAAGGCTGCGGCCTGGGCCTGCGCCTGCTCAAGCACCTGATGGCCCGGGCCTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTG < 6:245248/149‑1 AAGCACCTGATGGCCCGGGCCTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCGGCAATCGGATAATAGTCGCGGCGGC < 4:177439/147‑1 CACCTGATGGCCCGGGCCTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCGGCAATCGGATAATAGTCGCGGCGGCGGCCA < 6:202629/149‑1 CAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCGGCAATCGGATAATAGTCGCGGCGGCGGC > 3:270936/1‑88 CAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCGGCAATCGGATAATAGTCGCGGCGGCGGC < 4:270936/88‑1 CCGCCGGCAATCGGATAATAGTCGCGGCGGCGGCCAATTTCGTTGAAACCATAACGCTCGTACAAACGATAGGCCGACTGGTTGCTGGCGCGCACTTCCAGAAAGCATTCGCGGCCATTGAGCTGATAGGCCCGGGCCATCAGGTGCTT < 5:45449/149‑1 CCGCCGGCAATCGGATAATAGTCGCGGCGGCGGCCAATTTCGTTGAAACCATAACGCTCGTACAAACGATAGGCCGACTGGTTGCTGGCGCGCACTTCCAGAAAGCATTCGCGGCCATTGAGCTGATAGGCCCGGGCCATCAGGTGCTT > 7:116818/1‑149 AAACCAAGGCTGCGGCCTGGGCCTGCGCCTGCTCAAGCACCTGATGGCCCGGGCCTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/810533‑810688‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgccgGCAATCGGATAATAGTCGCGGCGGCGGCCAATTTCGTTGAAACCATAACGCTCGTACAAACGATAGGCCGACTGGTTGCTGGCGCGCACTTCCAGAAAGCATTCGCGGCCATTGAGCTGATAGGCCCGGGCCATCAGGTGCTT < NC_002947/810709‑810567 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |