| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 820225 = | 64 (1.130) | 4 (0.070) | 4/246 | NT | 6.4% | coding (705/1053 nt) | ada | fused O(6)‑alkylguanine DNA alkyltransferase/transcriptional activator |
| ? | NC_002947 | 820257 = | 57 (1.060) | coding (737/1053 nt) | ada | fused O(6)‑alkylguanine DNA alkyltransferase/transcriptional activator | |||||
ACCCGGCTTCCGGCCGGCACCTCACGCAGCGCCTGCCACACCCGCTCCTGAAACGCGGTGCCTTGCACATCCAGCGGCAGGGCCAGGCCCAAGGAGGGCGCTTCGACGAAACCGATCACTTCGGCGACCTTCTGCTCGTAGGCGCTGTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/820377‑820225‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgccgAAGTGATCGGTTTCGTCGAAGCGCCCTCCTTGGGCCTGGCCCTGCCGCTGGATGTGCAAGGCACCGCGTTTCAGGAGCGGGTGTGGCAGGCGCTGCGTGAGGTGCCGGCCGGAAGCCGGGTCAGCTACACCGACATCGCCGAGCG > NC_002947/820257‑820401 ACCCGGCTTCCGGCCGGCACCTCACGCAGCGCCTGCCACACCCGCTCCTGAAACGCGGTGCCTTGCACATCCAGCGGCAGGGCCAGGCCCAAGGAGGGCGCTTCGACGAAACCGATCACTTCGGCGACCTTCTGCTCGTAGGCGCTGTC < 5:290061/149‑1 ccgttctCGATCACTTCGGCGACCTTCTGCGCGTAGGCGCTGGCGCCGATGTGATCGGGTTCGTCGAAGCGCCCTCCTTGGGCCGGGCCCTGCCGCTGGATGTGCAAGGCACCGCGTTTCAGGAGCGGGTGTGGCAGGCGCTGCGTGA < 8:293641/141‑1 GATCACTTCGGCGCCCGTCTGCTCGTAGGCGCTGTCGCCGAAGTGATCGGTTTCGTCGAAGCGCCCTCCTTGGGCCTGGCACTGCCGCTGGATGTGCACGGCACCGCGTTTCAGGAGCGGGTGTGGCAGGCGCTGCGTGA > 7:293641/1‑140 TTCGGCGACCTTCTGCTCGTAGGCGCTGTCGCCGAAGTGATCGGTTTCGTCGAAGCGCCCTCCTTGGGCCTGGCCCTGCCGCTGGATGTGCAAGGCACCGCGTTTCAGGAGCGG < 1:232629/114‑1 TTCGGCGACCTTCTGCTCGTAGGCGCTGTCGCCGAAGTGATCGGTTTCGTCGAAGCGCCCTCCTTGGGCCTGGCCCTGCCGCTGGATGTGCAAGGCACCGCGTTTCAGGAGCGG > 2:232629/1‑114 GTCGCCGAAGTGATCGGTTTCGTCGAAGCGCCCTCCTTGGGCCTGGCCCTGCCGCTGGATGTGCAAGGCACCGCGTTTCAGGAGCGGGTGTGGCAGGCGCTGCGTGAGGTGCCGGCCGGAAGCCGGGTCAGCTACACCGACATCGCC > 2:302810/1‑147 GTCGCCGAAGTGATCGGTTTCGTCGAAGCGCCCTCCTTGGGCCTCGCCCTGCCGCTGGATGTGCAAGGAACCGCGTTTCAGGAGCGGGTGTGGCAGGCGCTGCGTGAGGTGCCGGCCGGAAGCCGGGTCAGCTACACCGACATCGCC > 4:137447/1‑147 GCCGAAGTGATCGGTTTCGTCGAAGCGCCCTCCTTGGGCCTGGCCCTGCCGCTGGATGTGCAAGGCACCGCGTTTCAGGAGCGGGTGTGGCAGGCGCTGCGTGAGGTGCCGGCCGGAAGCCGGGTCAGCTACACCGACATCGCCGAGCG > 6:106761/1‑149 ACCCGGCTTCCGGCCGGCACCTCACGCAGCGCCTGCCACACCCGCTCCTGAAACGCGGTGCCTTGCACATCCAGCGGCAGGGCCAGGCCCAAGGAGGGCGCTTCGACGAAACCGATCACTTCGGCGACCTTCTGCTCGTAGGCGCTGTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/820377‑820225‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgccgAAGTGATCGGTTTCGTCGAAGCGCCCTCCTTGGGCCTGGCCCTGCCGCTGGATGTGCAAGGCACCGCGTTTCAGGAGCGGGTGTGGCAGGCGCTGCGTGAGGTGCCGGCCGGAAGCCGGGTCAGCTACACCGACATCGCCGAGCG > NC_002947/820257‑820401 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |