| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 920583 = | 56 (0.990) | 4 (0.080) | 4/242 | NT | 6.8% | coding (180/312 nt) | PP_0801 | hypothetical protein |
| ? | NC_002947 | 920658 = | 58 (1.100) | coding (105/312 nt) | PP_0801 | hypothetical protein | |||||
TCAGCTGTGCCCTCTTCAGCGGTATTGCCCAGGCCTCCAGTAGTCAGGCCTGGAACGAGCAGCGCCAGCAGATGCTCAAGGCCTGCCTGACCGCAAGCCAGTTCAAGAACGCCCACGCTCGCGGCAAGCCCGCCGAGTTCGATGACCAGGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/920737‑920583‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcaggcCTTGAGCATCTGCTGGCGCTGCTCGTTCCAGGCCTGACTACTGGAGGCCTGGGCAATACCGCTGAAGAGGGCACAGCTGATCAAGATAGAGCTGAGAAGCTTCATACGCGATTCCGGCAATTTTCTTGCGAGGGGCGCGAATTATGCC > NC_002947/920658‑920805 TCAGCTGTGCCCTCTTCAGCGGTATTGCCCAGGCCTCCAGTAGTCAGGCCTGGAACGAGCAGCGCCAGCAGATGCTCAAGGCCTGCCTGACCGCAAGCCAGTTCAAGAACGCCCACGCTCGCGGCAAGCCCGCCGAGTTCGATGACCAG > 7:274287/1‑149TCAGCTGTGCCCTCTTCAGCGGTATTGCCCAGGCCTCCAGTAGTCAGGCCTGGAACGAGCAGCGCCAGCAGATGCTCAAGGCCTGCCTGACCGCAAGCCAGTTCAAGAACGCCCACGCTCGCGGCAAGCCCGCCGAGTTCGATGACCA < 4:56546/148‑1 TCAAGGCCTGCCTGACCGCAAGCCAGTTCAAGAACGCCCACGCTCGCGGCAAGCCCGCCGAGTTCGATGACCAGGCAGGCCTTGAGCATCTGCTGGCGCTGCTCGTTCCAGGCCT < 7:64453/115‑1 TCAAGGCCTGCCTGACCGCAAGCCAGTTCAAGAACGCCCACGCTCGCGGCAAGCCCGCCGAGTTCGATGACCAGGCAGGCCTTGAGCATCTGCTGGCGCTGCTCGTTCCAGGCCT > 8:64453/1‑115 AAGGCCTGCCTGACCGCAAGCCAGTTCAAGAACGCCCACGCTCGCGGCAAGCCCGCCGAGTTCGATGACCAGGCAGGCCTTGAGCATCTGCTGGCGCTGCTCGTTCCAGGCCTGACTACTGGAGGCCTGGGCAATACCGCTGAAGAGGG > 7:73674/1‑149 CGCCGAGTTCGATGACCAGGCAGGCCTTGAGCATCTGCTGGCGCTGCTCGTTCCAGGCCTGACTACTGGAGGCCTGGGCAATACCGCTGAAGAGGGCACAGCTGATCAAGATAGAGCTGAGAAGCTTCATACGCGATTCCGGCAATTTT < 8:73674/149‑1 AGGCAGGCCTTGAGCATCTGCTGGCGCTGCTCGTTCCAGGCCTGACTACTGGAGGCCTGGGCAATACCGCTGAAGAGGGCACAGCTGATCAAGATAGAGCTGAGAAGCTTCATACGCGATTCCGGCAATTTTCTTGCGAGGGGCGCGAA < 4:77067/149‑1 GCAGGCCTTGAGCATCTGCTGGCGCTGCTCGTTCCAGGCCTGACTACTGGAGGCCTGGGCAATACCGCTGAAGAGGGCACAGCTGATCAAGATAGAGCTGAGAAGCTTCATACGCGATTCCGGCAATTTTCTTGCGA < 7:35691/137‑1 GCAGGCCTTGAGCATCTGCTGGCGCTGCTCGTTCCAGGCCTGACTACTGGAGGCCTGGGCAATACCGCTGAAGAGGGCACAGCTGATCAAGATAGAGCTGAGAAGCTTCATACGCGATTCCGGCAATTTTCTTGCGA > 8:35691/1‑137 CCTTGAGCATCTGCTGGCGCTGCTCGTTCCAGGCCTGACTACTGGAGGCCTGGGCAATACCGCTGAAGAGGGCACAGCTGATCAAGATAGAGCTGAGAAGCTTCATACGCGATTCCGGCAATTTTCTTGCGAGGGGCGCGAATTATGCC < 1:82505/149‑1 TCAGCTGTGCCCTCTTCAGCGGTATTGCCCAGGCCTCCAGTAGTCAGGCCTGGAACGAGCAGCGCCAGCAGATGCTCAAGGCCTGCCTGACCGCAAGCCAGTTCAAGAACGCCCACGCTCGCGGCAAGCCCGCCGAGTTCGATGACCAGGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/920737‑920583‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcaggcCTTGAGCATCTGCTGGCGCTGCTCGTTCCAGGCCTGACTACTGGAGGCCTGGGCAATACCGCTGAAGAGGGCACAGCTGATCAAGATAGAGCTGAGAAGCTTCATACGCGATTCCGGCAATTTTCTTGCGAGGGGCGCGAATTATGCC > NC_002947/920658‑920805 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |