New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1010241 =	53 (0.940)	4 (0.070)	4/250	NT	7.3%	coding (95/942 nt)	PP_0870	glycine betaine/carnitine/choline ABC transporter substrate‑binding protein
	?	NC_002947	1010286 =	51 (0.940)					coding (50/942 nt)	PP_0870	glycine betaine/carnitine/choline ABC transporter substrate‑binding protein

GCACTGGTACTGGACGCGGCGGTGAGTTTCTCCAGCAGGCGCTGGCTGGAACGTGGCCTGGCCCAATAAGGATAGGAAACGCATGAAGAAGAGAATCGCCTTGCTGCTGGGCGCGGCCCTGCTGTTCGCAGGATTTGCCCAGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1010387‑1010241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcAAGGCGATTCTCTTCTTCATGCGTTTCCTATCCTTATTGGGCCAGGCCACGTTCCAGCCAGCGCCTGCTGGAGAAACTCACCGCCGCGTCCAGTACCAGTGCCAGTAGCGCGGTGCAGGCGGCCCCCAGCAGCAGCTGCGGCTGGT  >  NC_002947/1010286‑1010431                                                                                                                                                                                                                                                                                                       GCACTGGTACTGGACGCGGCGGTGAGTTTCTCCAGCAGGCGCTGGCTGGAACGTGGCCTGGCCCAATAAGGATAGGAAACGCATGAAGAAGAGAATCGCCTTGCTGCTGGGCGCGGCCCTGCTGTTCGCAGGATTTGCCCAGGCAGC                                                                                                                                                    <  3:143377/147‑1                                                                                                   CCTTGCTGCTGGGCGCGGCCCTGCTGTTCGCAGGATTTGCCCAGGCAGCAAGGCGATTCTCTTCTTCATGCGTTTCCTATCCTTATTGGGCCAGGCCACGTTCCAGCCAGCGCCTGCTGGAGAA                                                                         >  5:106988/1‑124                                                                                                   CCTTGCTGCTGGGCGCGGCCCTGCTGTTCGCAGGATTTGCCCAGGCAGCAAGGCGATTCTCTTCTTCATGCGTTTCCTATCCTTATTGGGCCAGGCCACGTTCCAGCCAGCGCCTGCTGGAGAA                                                                         <  6:106988/124‑1                                                                                                         TGCTGGGCGCGGCCCTGCTGTTCGCAGGATTTGCCCAGGCAGCAAGGCGATTCTCTTCTTCATGCGTTTCCTATCCTTATTGGGCCAGGCCACGTTCCAGCCAGCGCCTGCTGGAGAAACTCACCGCCGCGTCCAGTACCAGT                                                >  1:345001/1‑143                                                                                                         TGCTGGGCGCGGCCCTGCTGTTCGCAGGATTTGCCCAGGCAGCAAGGCGATTCTCTTCTTCATGCGTTTCCTATCCTTATTGGGCCAGGCCACGTTCCAGCCAGCGCCTGCTGGAGAAACTCACCGCCGCGTCCAGTACCAGT                                                <  2:345001/143‑1                                                                                                                                               GCAGCAAGGCGATTCTCTTCTTCATGCGTTTCCTATCCTTATTGGGCCAGGCCACGTTCCAGCCAGCGCCTGCTGGAGAAACTCACCGCCGCGTCCAGTACCAGTGCCAGTAGCGCGGTGCAGGCGGCCCCCAGCAGCAGCTGCGGCTG    <  3:161378/149‑1                                                                                                                                                 AGCAAGGCGATTCTCTTCTTCATGCGTTTCCTATCCTTATTGGGCCAGGCCACGTTCCAGCCAGCGCCTGCTGGAGAAACTCACCGCCGCGTCCAGTACCAGTGCCAGTAGCGCGGTGCAGGCGGCCCCCACCAGCCGCAGCTGCTGct  <  1:270852/149‑3                                                                                                                                                                                                                                                                                                       GCACTGGTACTGGACGCGGCGGTGAGTTTCTCCAGCAGGCGCTGGCTGGAACGTGGCCTGGCCCAATAAGGATAGGAAACGCATGAAGAAGAGAATCGCCTTGCTGCTGGGCGCGGCCCTGCTGTTCGCAGGATTTGCCCAGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1010387‑1010241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcAAGGCGATTCTCTTCTTCATGCGTTTCCTATCCTTATTGGGCCAGGCCACGTTCCAGCCAGCGCCTGCTGGAGAAACTCACCGCCGCGTCCAGTACCAGTGCCAGTAGCGCGGTGCAGGCGGCCCCCAGCAGCAGCTGCGGCTGGT  >  NC_002947/1010286‑1010431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.