| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1055572 = | 59 (1.040) | 3 (0.050) | 3/252 | NT | 5.3% | coding (260/1332 nt) | PP_0913 | hypothetical protein |
| ? | NC_002947 | 1055610 = | 49 (0.890) | coding (222/1332 nt) | PP_0913 | hypothetical protein | |||||
CTGCTGCTGCCACCACCGCTGCGCCAGGGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACAGCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1055722‑1055572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTCGTCC > NC_002947/1055610‑1055757 CTGCTGCTGCCACCACCGCTGCGCCAGGGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACAGCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTG < 7:81179/149‑1CTGCTGCTGCCACCACCGCTGCGCCAGGGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACAGCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTG < 7:86211/149‑1 CCACCACCGCTGCGCCAGGGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACAGCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTG < 5:116999/140‑1 CCACCACCGCTGCGCCAGGGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACAGCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTG > 6:116999/1‑140 CTGCCAAGACGTTGCAGACCGCGGTCGATGCGTTCCTGGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGT < 1:131591/142‑1 CTGCCAAGACGTTGCAGACCGCGGTCGATGCGTTCCTGGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGT > 2:131591/1‑142 CCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTGGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAG > 4:261162/1‑147 GGCAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTC < 5:330452/147‑1 CAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTCGTCC < 2:358388/149‑1 CTGCTGCTGCCACCACCGCTGCGCCAGGGGCTGTCGACGAAGCAGCCGGCAAAGCCGTGGTCAAGCATTACACCGACATGGTCTACGCCGTGTACAGCGACTCGCTGAGCACTGCCAAGACGCTGCAGACCGCGGTCGATGCGTTCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1055722‑1055572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcAGTGCTCAGCGAGTCGCTGTACACGGCGTAGACCATGTCGGTGTAATGCTTGACCACGGCTTTGCCGGCTGCTTCGTCGACAGCCCCTGGCGCAGCGGTGGTGGCAGCAGCAGGTGCCTGGGCTTGCGGCGCGGCGGCTTTTTCGTCC > NC_002947/1055610‑1055757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |