New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1330937 =	NA (NA)	5 (0.090)	5/250	NT	NA	coding (162/1644 nt)	PP_1157	acetolactate synthase
	?	NC_002947	1330981 =	NA (NA)					coding (206/1644 nt)	PP_1157	acetolactate synthase

ACTTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1331088‑1330937 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCA  >  NC_002947/1330981‑1331127                                                                                                                                                                                                                                                                                                             ACTTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCA                                                                                                                                                        <  2:107934/149‑1   TTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCCGGCGACCGTAGGTGGCAGC                                                                                                                                                      >  6:357302/1‑149                                                                                                            AGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGA                                                  >  3:17379/1‑144                                                                                                            AGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGA                                                  <  4:17379/144‑1                                                                                                               CTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAG                                          >  6:92250/1‑149                                                                                                                     CCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAG                                    <  5:92250/149‑1                                                                                                                                          CCGTAGGTGGCAGCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATT               >  2:301453/1‑149                                                                                                                                                     AGCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCG     <  8:162702/148‑1                                                                                                                                                      GCCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGG    >  2:210366/1‑148                                                                                                                                                       CCTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCA  >  5:266823/1‑149                                                                                                                                                                                                                                                                                                             ACTTCTTGATCGGCTTCTGCCCGGTGATCATCATCATCGGCATGCCGCCCAGGTAGGCGTAGGCGCTGGCGGTCACCAGGTTGGTGGCACCAGGGCCGAGGGTCGACAGGCTGACGCCGGTCTTGCCGGTCAGGCGACCGTAGGTGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1331088‑1330937 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccTGTCGACCCTCGGCCCTGGTGCCACCAACCTGGTGACCGCCAGCGCCTACGCCTACCTGGGCGGCATGCCGATGATGATGATCACCGGGCAGAAGCCGATCAAGAAGTCCAAGCAGGGTCGCTTCCAGATCATTGACGTGTGCGGCA  >  NC_002947/1330981‑1331127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.