New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1729663 =	60 (1.060)	4 (0.070)	3/248	NT	6.0%	coding (274/813 nt)	rlmAA	23S rRNA (guanine(745)‑N(1))‑methyltransferase
	?	NC_002947	1729727 =	69 (1.280)					coding (210/813 nt)	rlmAA	23S rRNA (guanine(745)‑N(1))‑methyltransferase

CACAAGAACAGCCGCGACCCCGGTGACAACCAGGCGATGGTCGAGGCACGCCGCGACTTTCTCGACGCCGGCCATTACGCGCCGGTCGCCCGCCGCCTGGCCGAGCTGGCCGCCGAGCGCCAGCCTGGCGCCTGGCTGGACATCGGCTGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1729816‑1729663 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgGGCGACCGGCGCGTAATGGCCGGCGTCGAGAAAGTCGCGGCGTGCCTCGACCATCGCCTGGTTGTCACCGGGGTCGCGGCTGTTCTTGTGCTGCACCGGCAGCAGGTTCAGGT  >  NC_002947/1729727‑1729839                                                                                                                                                                                                                                                                             CACAAGAACAGCCGCGACCCCGGTGACAACCAGGCGATGGTCGAGGCACGCCGCGACTTTCTCGACGCCGGCCATTACGCGCCGGTCGCCCGCCGCCTGGCCGAGCTGGCCGCCGAGCGCCAGCCTGGCGCCTGGCTGGACATCGGCTG                                                                                                                        >  5:152478/1‑149                                                                                            GCCGCCTGGCCGAGCTGGCCGCCGAGCGCCAGCCTGGCGCCTGGCTGGACATCGGCTGCGGCGGGCGACCGGCGCGTAATGGCCGGCGTCGAGAAAGTCGCGGCGTGCCTCGACCATCGCCTGGTTGTCACCGGGGTCGCGGCTGTTCT                             >  6:220587/1‑149                                                                                            GCCGCCTGGCCGAGCTGGCCGCCGAGCGCCAGCCTGGCGCCTGGCTGGACATCGGCTGCGGCGGGCGACCGGCGCGTAATGGCCGGCGTCGAGAAAGTCGCGGCGTGCCTCGACCATCGCCTGGTTGTCACCGGGGTCGCGGCTGTTCT                             >  6:295483/1‑149                                                                                                              CCGCCGAGCGCCAGCCTGGCGCCTGGCTGGACATCGGCTGCGGCGGGCGACCGGCGCGTAATGGCCGGCGTCGAGAAAGTCGCGGCGTGCCTCGACCATCGCCTGGTTGTCACCGGGGTCGCGGCTGTTCTTGTGCTGCACCGGCAGCA           <  5:220587/149‑1                                                                                                                       GCCAGCCTGGCGCCTGGCTGGACATCGGCTGCGGCGGGCGACCGGCGCGTAATGGCCGGCGTCGAGAAAGTCGCGGCGTGCCTCGACCATCGCCTGGTTGTCACCGGGGTCGCGGCTGTTCTTGTGCTGCACCGGCAGCAGGTTCAGGT  <  5:295483/149‑1                                                                                                                                                                                                                                                                             CACAAGAACAGCCGCGACCCCGGTGACAACCAGGCGATGGTCGAGGCACGCCGCGACTTTCTCGACGCCGGCCATTACGCGCCGGTCGCCCGCCGCCTGGCCGAGCTGGCCGCCGAGCGCCAGCCTGGCGCCTGGCTGGACATCGGCTGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1729816‑1729663 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgGGCGACCGGCGCGTAATGGCCGGCGTCGAGAAAGTCGCGGCGTGCCTCGACCATCGCCTGGTTGTCACCGGGGTCGCGGCTGTTCTTGTGCTGCACCGGCAGCAGGTTCAGGT  >  NC_002947/1729727‑1729839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.