New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1800376 =	64 (1.130)	4 (0.070)	4/246	NT	6.2%	coding (360/3525 nt)	dnaEA	DNA polymerase III subunit alpha
	?	NC_002947	1800454 =	61 (1.140)					coding (438/3525 nt)	dnaEA	DNA polymerase III subunit alpha

CTGCACTTCAACGTAGAAGCGCTCGGGGAACATGCCCATCCAGTCTTGAAGAAGCGCTTCGGCTTCGTCTTGCCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1800526‑1800376 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggcgGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGAGCGCTTCTACGTTGAAGTGCAGCGCACCAATCGGGCACGCGACGAAGAATACGTGCACGCGGCGGTGGCATTGGCCGACAAGCTTGGCGCCCCGCTG  >  NC_002947/1800454‑1800601                                                                                                                                                                                                                                                                                                             CTGCACTTCAACGTAGAAGCGCTCGGGGAACATGCCCATCCAGTCTTGAAGAAGCGCTTCGGCTTCGTCTTGCCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGG                                                                                                                                                        <  3:347969/149‑1  TGCACTTCAACGTAGAAGCGCTCGGGGAACATGCCCATCCAGTCTTGAAGAAGCGCTTCGGCTTCGTCTTGCCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGG                                                                                                                                                         <  7:245883/147‑1  TGCACTTCAACGTAGAAGCGCTCGGGGAACATGCCCATCCAGTCTTGAAGAAGCGCTTCGGCTTCGTCTTGCCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGG                                                                                                                                                         >  8:245883/1‑147                                          AGTCTTGAAGAAGCGCTTCGGCTTCGTCTTGCCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGG                                                                                                                                                        >  1:246556/1‑108                                          AGTCTTGAAGAAGCGCTTCGGCTTCGTCTTGCCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGG                                                                                                                                                        <  2:246556/108‑1                                                                      TTGCCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGAGCGCTTCTACGTTG                                                                                     >  3:76349/1‑147                                                                           GCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGAGCGCTTCTACGTTGAAGTG                                                                                >  7:140613/1‑147                                                                                                        CCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGAGCGCTTCTACGTTGAAGTGCAGCGCACCAATCGGGCACGCGACGAAGAAT                                                 <  8:140613/149‑1                                                                                                                         CAGGGCAATCAGGCCCTCGCTGGCCGGGGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGAGCGCTTCTACGTTGAAGTGCAGCGCACCAATCGGGCACGCGACGAAGAATACGTGCACGCGGCGGTG                                <  4:76349/149‑1                                                                                                                                                    GGCGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGAGCGCTTCTACGTTGAAGTGCAGCGCACCAATCGGGCACGCGACGAAGAATACGTGCACGCGGCGGTGGCATTGGCCGACAAGCTTGGCGCCCCG     <  7:186892/149‑1                                                                                                                                                      CGGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGAGCGCTTCTACGTTGAAGTGCAGCGCACCAATCGGGCACGCGACGAAGAATACGTGCACGCGGCGGTGGCATTGGCCGACAAGCTTGGCGCCCCGCT   <  5:259388/149‑1                                                                                                                                                       GGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGAGCGCTTCTACGTTGAAGTGCAGCGCACCAATCGGGCACGCGACGAAGAATACGTGCACGCGGCGGTGGCATTGGCCGACAAGCTTGGCGCCCCGCTG  <  6:354866/149‑1                                                                                                                                                       GGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGAGCGCTTCTACGTTGAAGTGCAGCGCACCAATCGGGCACGCGACGAAGAATACGTGCACGCGGCGGTGGC                              <  5:213689/121‑1                                                                                                                                                       GGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGAGCGCTTCTACGTTGAAGTGCAGCGCACCAATCGGGCACGCGACGAAGAATACGTGCACGCGGCGGTGGC                              >  6:213689/1‑121                                                                                                                                                                                                                                                                                                             CTGCACTTCAACGTAGAAGCGCTCGGGGAACATGCCCATCCAGTCTTGAAGAAGCGCTTCGGCTTCGTCTTGCCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1800526‑1800376 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggcgGCAAGACGAAGCCGAAGCGCTTCTTCAAGACTGGATGGGCATGTTCCCCGAGCGCTTCTACGTTGAAGTGCAGCGCACCAATCGGGCACGCGACGAAGAATACGTGCACGCGGCGGTGGCATTGGCCGACAAGCTTGGCGCCCCGCTG  >  NC_002947/1800454‑1800601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.