New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1871240 | 46 (0.810) | 6 (0.110) | 5/248 | NT | 11.6% | coding (514/993 nt) | cobC | adenosylcobinamide‑phosphate synthase subunit beta |
? | NC_002947 | = 1871269 | 48 (0.890) | coding (543/993 nt) | cobC | adenosylcobinamide‑phosphate synthase subunit beta |
GCTCGACGGCCTCGATGTGCTGGTGCTGGTGAACCCCAACAACCCGACCGGCCAGCGGGTGTCGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCCCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACACCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1871089‑1871240 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccggGCGTTCGGCGCAGTCCACCACGCTGTCCGCCGGGGTGTTGTCCATGAATGCTTCGTCGACCAGCAGCCAGCCACCGCGGGCAGCCAGGCGAGCATGCCAAGCCAGCAGGCGTTCGCGCGACACCCGCTGGCCGGTCGGGTTGTT < NC_002947/1871269‑1871126 GCTCGACGGCCTCGATGTGCTGGTGCTGGTGAACCCCAACAACCCGACCGGCCAGCGGGTGTCGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCCCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACACCC > 5:170803/1‑149 TCGACGGCCTCGATGTGCTGGTGCTGGTGAACCCCAACAACCCGACCGGCCAGCGGGTGTCGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCCCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACACCCCG > 6:266764/1‑149 GACGGCCTCGATGTGCGGGTGCTGGTGAACCCCAACAACCCGACCGGCCAGCGGGTGTTGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCCCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACACCCCGG < 1:292621/148‑1 TGTGCTGGTGCTGGTGAACCCCAACAACCCGACCGGCCAGCGGGTGTCGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCCCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACACCCCGGGCGTTCGGCG > 3:94126/1‑147 TGGTGAACCCCAACAACCCGACCGGCCAGCGGGTGTCGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCCCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACACCCCGGGCGTTCGGCGCAGTCCACCACGC > 5:176169/1‑149 CCAACAACCCGACCGGCCAGCGGGTGTCGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCCCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACACCCCGGGCGTTCGGCGCAGTCCACCACGCTGTCCGCCG > 7:70971/1‑149 AACAACCCGACCGGCCAGCGGGTGTCGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCCCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACACCCCGGGCGTTCGGCGCAGTCCACCACGCTGTCCGCCGGG < 8:70971/149‑1 ACAACCCGACCGGCCAGCGGGTGTCGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCCCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACACCCCGGGCGTTCGGCGCAGTCCACCACGCTGTCCGCCGGGG < 4:94126/149‑1 ACAACCCGACCGGCCAGCGGGTGTCGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCCCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACACCCCGGGCGTTCGGCGCAGTCCACCACGCTGTCCGCCGGGG < 6:176169/149‑1 CCCCGGGCGTTCGGCGCAGTCCACCACGCTGTCCGCCGGGGTGTTGTCCATGAATGCTTCGTCGACCAGCAGCCAGCCACCGCGGGCAGCCAGGCGAGCATGCCAAGCCAGCAGGCGTTC > 3:227765/1‑120 CCCCGGGCGTTCGGCGCAGTCCACCACGCTGTCCGCCGGGGTGTTGTCCATGAATGCTTCGTCGACCAGCAGCCAGCCACCGCGGGCAGCCAGGCGAGCATGCCAAGCCAGCAGGCGTTC < 4:227765/120‑1 CCCCGGGCGTTCGGCGCAATCCACCACGCTGTCCGCCGGGGTGTTGTCCATGAATGCTTCGTCGACCAGCAGCCAGCCACCGCGGGCAGCCAGGCGAGCATGCCAAGCCAGCAGGCGTTCGCGCGACACCCGCTGGCCGGTCGGGTTGT > 4:79822/1‑149 CCCGGGCGTTCGGCGCAGTCCACCACGCTGTCCGCCGGGGTGTTGTCCATGAATGCTTCGTCGACCAGCAGCCAGCCACCGCGGGCAGCCAGGCGAGCATGCCAAGCCAGCAGGCGTTCGCGCGACACCCGCTGGCCGGTCGGGTTGTT > 6:170803/1‑149 GCTCGACGGCCTCGATGTGCTGGTGCTGGTGAACCCCAACAACCCGACCGGCCAGCGGGTGTCGCGCGAACGCCTGCTGGCTTGGCATGCTCGCCTGGCTGCCCGCGGTGGCTGGCTGCTGGTCGACGAAGCATTCATGGACAACACCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1871089‑1871240 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccggGCGTTCGGCGCAGTCCACCACGCTGTCCGCCGGGGTGTTGTCCATGAATGCTTCGTCGACCAGCAGCCAGCCACCGCGGGCAGCCAGGCGAGCATGCCAAGCCAGCAGGCGTTCGCGCGACACCCGCTGGCCGGTCGGGTTGTT < NC_002947/1871269‑1871126 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |