| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1916253 | 65 (1.150) | 4 (0.070) | 4/250 | NT | 5.9% | coding (393/438 nt) | PP_1715 | hypothetical protein |
| ? | NC_002947 | = 1916271 | 64 (1.170) | coding (411/438 nt) | PP_1715 | hypothetical protein | |||||
GATGCCATCCCGGACTGGTTGCTGGGGGTGGGTTTCCTCGATGACATCGCGGTGCTGGGCTGGGTACTGAAAACCGTGGCCGACGAGTTGGCGCGCTTCAAGGCCTGGCGCGATAGCCAGGCACCCGAACGGCTGCGCGTGGTCGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1916104‑1916253‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcTTCCGGGGTAGCCGGCAGGCGCTCGACCACGCGCAGCCGTTCGGGTGCCTGGCTATCGCGCCAGGCCTTGAAGCGCGCCAACTCGTCGGCCACGGTTTTCAGTACCCAGCCCAGCACCGCGATGTCATCGAGGAAACCCACCCCCAG < NC_002947/1916271‑1916125 GATGCCATCCCGGACTGGTTGCTGGGGGTGGGTTTCCTCGATGACATCGCGGTGCTGGGCTGGGTACTGAAAACCGTGGCCGACGAGTTGGCGCGCTTCAAGGCCTGGCGCGATAGCCAGGCACCCGAACGGCTGCGCGTGGTCGAGCG > 2:191061/1‑149GATGCCATCCCGGACTGGTTGCTGGGGGTGGGTTTCCTCGATGACATCGCGGTGCTGGGCTGGGTACTGAAAACCGTGGCCGACGAGTTGGCGCGCTTCAAGGCCTGGCGCGATAGCCAGGCACCCGAACGGCTGCGCGTGGTCGAGC < 2:175085/148‑1 CTCGATGACATCGCGGTGCTGGGCTGGGTACTGAAAACCGTGGCCGACGAGTTGGCGCGCTTCAAGGCCTGGCGCGATAGCCAGGCACCCGAACGGCTGCGCGTGGTCGAGCGCTTCCGGGGTAGCCGGCAGGCGCTCGACCAC > 1:275881/1‑144 CTCGATGACATCGCGGTGCTGGGCTGGGTACTGAAAACCGTGGCCGACGAGTTGGCGCGCTTCAAGGCCTGGCGCGATAGCCAGGCACCCGAACGGCTGCGCGTGGTCGAGCGCTTCCGGGGTAGCCGGCAGGCGCTCGACCAC < 2:275881/144‑1 CCTGGCGCGATAGCCAGGCACCCGAACGGCTGCGCGTGGTCGAGCGCTTCCGGGGTAGCCGGCAGGCGCTCGA > 3:321794/1‑73 CCTGGCGCGATAGCCAGGCACCCGAACGGCTGCGCGTGGTCGAGCGCTTCCGGGGTAGCCGGCAGGCGCTCGA < 4:321794/73‑1 GCGCTTCCGGGGTAGCCGGCAGGCGCTCGACCACGCGCAGCCGTTCGGGTGCCTGGCTATCGCGCCAGGCCTTGAAGCGCGCCAACTCGTCGGCCACGGTTTTCAGTACCCAGCCCAGCACCGCGATGTCATCGAGGAAACCCACCCCC < 8:174730/149‑1 CGCTTCCGGGGTAGCCGGCAGGCGCTCGACCACGCGCAGCCGTTCGGGTGCCTGGCTATCGCGCCAGGCCTTGAAGCGCGCCAACTCGTCGGCCACGGTTTTCAGTACCCAGCCCAGCACCGCGATGTCATCGAGGAAACCCACCCCCA < 2:286294/149‑1 CGCTTCCGGGGTAGCCGGCAGGCGCTCGACCACGCGCAGCCGTTCGGGTGCCTGGCTATCGCGCCAGGCCTTGAAGCGCGCCAACTCGTCGGCCACGGTTTTCAGTACCCAGCCCAGCACCGCGATGTCATCGAGGAAACCCACCCCCA < 8:290193/149‑1 CGCTTCCGGGGTAGCCGGCAGGCGCTCGACCACGCGCAGCCGTTCGGGTGCCTGGCTATCGCGCCAGGCCTTGAAGCGCGCCAACTCGTCGGCCACGGTTTTCAGTACACAGCCCAGCACCGCGATGTCATCGAGGAAACCCACCCC > 4:124613/1‑147 CTTCCGGGGTAGCCGGCAGGCGCTCGACCACGCGCAGCCGTTCGGGTGCCTGGCTATCGCGCCAGGCCTTGAAGCGCGCCAACTCGTCGGCCACGGTTTTCAGTACCCAGCCCAGCACCGCGATGTCATCGAGGAAACCCACCCCCAG > 1:358600/1‑148 GATGCCATCCCGGACTGGTTGCTGGGGGTGGGTTTCCTCGATGACATCGCGGTGCTGGGCTGGGTACTGAAAACCGTGGCCGACGAGTTGGCGCGCTTCAAGGCCTGGCGCGATAGCCAGGCACCCGAACGGCTGCGCGTGGTCGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1916104‑1916253‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcTTCCGGGGTAGCCGGCAGGCGCTCGACCACGCGCAGCCGTTCGGGTGCCTGGCTATCGCGCCAGGCCTTGAAGCGCGCCAACTCGTCGGCCACGGTTTTCAGTACCCAGCCCAGCACCGCGATGTCATCGAGGAAACCCACCCCCAG < NC_002947/1916271‑1916125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |