New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1968031 =	83 (1.460)	5 (0.100)	5/234	NT	6.9%	intergenic (‑42/+116)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
	?	NC_002947	1968116 =	60 (1.180)					intergenic (‑127/+31)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase

AACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1968187‑1968031 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGATGAATATAGCCGTAGCG  >  NC_002947/1968116‑1968260                                                                                                                                                                                                                                                                                                                  AACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCC                                                                                                                                                             <  1:361048/149‑1  ACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCG                                                                                                                                                            >  4:317714/1‑149     GCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTC                                                                                                                                                         >  5:339150/1‑149        CAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTA                                                                                                                                                      >  8:265715/1‑149         AAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTAC                                                                                                                                                     >  3:46312/1‑149               ATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTTGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTA                                                                                                                                                      <  8:223583/142‑1               ATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTA                                                                                                                                                      >  7:223583/1‑142                TCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAAC                                                                                                                                                               >  1:177868/1‑132                TCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAAC                                                                                                                                                               <  2:177868/132‑1                  GACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGC                                                                                                                                                           <  8:330137/134‑1                  GACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGC                                                                                                                                                           >  7:330137/1‑134                                             CAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCGGATCGGGCGCATTCGCGGGGAAACCCGCTCCTACGAAAGGGCGGTGCGCGGGCATCGGGCTGGGTTCAGC                                                                                                                 >  6:117409/1‑149                                                                     TTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGTACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTA                                                                                                                                                      <  7:228550/88‑1                                                                                         CCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGC                                                                                 >  5:370995/1‑135                                                                                         CCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGC                                                                                 <  6:370995/135‑1                                                                                           GCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTG                                                                 >  8:180711/1‑149                                                                                                  CGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACC                                                          <  7:180711/149‑1                                                                                                                                                  ACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGCAAGCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCCCCACCACGTCGGCACCCCAGTGGTTGGGGTTGTCCTCTGGATGAATAT            >  1:103159/1‑149                                                                                                                                                  ACCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGATGAATATAG          >  3:9728/1‑149                                                                                                                                                   CCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGG                               <  4:163124/127‑1                                                                                                                                                   CCCGCTCCTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGG                               >  3:163124/1‑127                                                                                                                                                          CTACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGATGAATATAGCCGTAGCG  >  1:104696/1‑149                                                                                                                                                           TACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGATGAATATAGCCGTAGCG  >  5:182052/1‑148                                                                                                                                                           TACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGATGAATATAGCCGTAGCG  >  5:84387/1‑148                                                                                                                                                           TACAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCAGCACAGC‑‑GCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGATGAATATAGCCGTAGCG  >  5:255529/1‑148                                                                                                                                                                                                                                                                                                                  AACTGCGCAAAGTGATCGACAGCGCGCTGTGCGGGTGCTGAACCCAGACCGATGACCGGGCACCGCCCTTTTGTAGGAGCGGGTTCACCCGCGAATGCGCCAGCCCGGACAACCCTGGCGCCTGATCGGACGCATTCGCGGGTAAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1968187‑1968031 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacAAAAGGGCGGTGCCCGGTCATCGGTCTGGGTTCAGCACCCGCACAGC‑‑GCGCTGTCGATCACTTTGCGCAGTTCCAGCGGGTGGTCCACCACCACGTCGGCACCCCAGTTGTTGGGGTTGTCCTCTGGATGAATATAGCCGTAGCG  >  NC_002947/1968116‑1968260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.