| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2194094 = | 50 (0.880) | 3 (0.060) | 3/250 | NT | 5.5% | coding (1571/2151 nt) | PP_1940 | methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 2194125 = | 55 (1.010) | coding (1540/2151 nt) | PP_1940 | methyl‑accepting chemotaxis transducer | |||||
TGAATGCGACTGCCCAAGATGTTGCGCGGAGTGCTGCGCAAGCTGCCAAAGCGGCGTGTGATGCCGACCAGGCTACACGCGAGGGATTGTCAGTGATCGGGCGCACGACTAGTAGCATAGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2194217‑2194094‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaCTGACAATCCCTCGCGTGTAGCCTGGTCGGCATCACACGCCGCTTTGGCAGCTTGCGCAGCACTCCGCGCAACATCTTGGGCAGTCGCATTCATTTCTTGAGATGCGGTGACCACCAAATGGACTTGACGAGATTGCTCCTCCATCCC > NC_002947/2194125‑2194272 TGAATGCGACTGCCCAAGATGTTGCGCGGAGTGCTGCGCAAGCTGCCAAAGCGGCGTGTGATGCCGACCAGGCTACACGCGAGGGATTGTCAGTGATCGGGCGCACGACTAGTAGCATAGA > 3:12393/1‑121TGAATGCGACTGCCCAAGATGTTGCGCGGAGTGCTGCGCAAGCTGCCAAAGCGGCGTGTGATGCCGACCAGGCTACACGCGAGGGATTGTCAGTGATCGGGCGCACGACTAGTAGCATAGA < 4:12393/121‑1 TTGTCAGTGATCGGGCGCACGACTAGTAGCATAGATCACTGACAATCCCTCGCGTGTAGCCTGGTCGGCATCACACGCCGCTTTGGCAGCTTGCGCAGCACTCCGCGCAACATCTTGGGCAGTAGCATTCATTTCTTGAGATGCGGTGA > 5:113354/1‑149 GTGATCGGGCGCACGACTAGTAGCATAGATCACTGACAATCCCTCGCGTGTAGCCTGGTCGGCATCACACGCCGCTTTGGCAGCTTGCGCAGCACTCCGCGCAACATCTTGGGCAGTCGCATTCATTTCTTG > 3:118017/1‑132 GTGATCGGGCGCACGACTAGTAGCATAGATCACTGACAATCCCTCGCGTGTAGCCTGGTCGGCATCACACGCCGCTTTGGCAGCTTGCGCAGCACTCCGCGCAACATCTTGGGCAGTCGCATTCATTTCTTG < 4:118017/132‑1 ACTGACAATCCCTCGCGTGTAGCCTGGTCGGCATCACACGCCGCTTTGGCAGCTTGCGCAGCACTCCGCGCAACATCTTGGGCAGTCGCATTCATTTCTTGAGATGCGGTGACCACCAAATGGACTTGACGAGATTGCTCCTCCATCCC > 2:320995/1‑149 TGAATGCGACTGCCCAAGATGTTGCGCGGAGTGCTGCGCAAGCTGCCAAAGCGGCGTGTGATGCCGACCAGGCTACACGCGAGGGATTGTCAGTGATCGGGCGCACGACTAGTAGCATAGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2194217‑2194094‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaCTGACAATCCCTCGCGTGTAGCCTGGTCGGCATCACACGCCGCTTTGGCAGCTTGCGCAGCACTCCGCGCAACATCTTGGGCAGTCGCATTCATTTCTTGAGATGCGGTGACCACCAAATGGACTTGACGAGATTGCTCCTCCATCCC > NC_002947/2194125‑2194272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |