New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2258072	NA (NA)	7 (0.130)	5/252	NT	NA	intergenic (+127/‑265)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2258116	NA (NA)					intergenic (+171/‑221)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase

AGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCCTTACGGCGAGT‑CACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2257921‑2258072 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGT  <  NC_002947/2258116‑2257970                                                                                                                                                                                                                                                                                                                   AGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCCTTACGGCGAGT‑CACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTC                                                                                                                                                             >  4:24360/1‑149  GCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCCTTACGGCGAGT‑CACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCCGGGTCCCCTAACAACGGCCATGCTCa                                                                                                                                                            >  3:309026/1‑148    CGCCAAAACCAAAAGACCTTGAAAGGGATGGCCCTTACGGCGAGT‑CACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCG                                                                                                                                                          >  3:247667/1‑149    CGCCAAAACCAAAAGACCTTGAAAGGGATGGCCCTTACGGCGAGT‑CACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCG                                                                                                                                                          <  2:308283/149‑1    CGCCAAAACCAAAAGACCTTGAAAGGGATGGCCCTTACGGCGAGT‑CACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCG                                                                                                                                                          <  8:168627/149‑1      CCAAAACCAAAAGACCTTGAAAGGGATGGCCCTTACGGCGAGTGCACTTTTTGTCAAACGCGAAAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTAAATCCGGCCTTGAACCCGc                                                                                                                                                         >  1:251304/1‑148                                             GAGT‑CACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTCGCTCCCGGCAGGACCGCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCG                                                                                                                <  7:209769/149‑1                                                   ACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCG                                                                                                       >  6:345466/1‑149                                                         TGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGC                                                                                                  <  5:345466/148‑1                                                         TGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCGGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCG‑CTGAGGCCCCACGATGGGGCCTTCGGCGCGGTCCTGCCGG                                                                                                      <  5:121587/148‑1                                                          GTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGA                                                                                                    <  5:198751/145‑1                                                          GTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGA                                                                                                    >  6:198751/1‑145                                                          GTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGG                                                                                                      <  6:109897/148‑1                                                                                                                                                      ccgGTCA‑‑A‑‑GCG‑CGGCGGCCCCTGGTTGGGGCCTTCGGCGCGGTCCGGCCGGGAGCAAGGCCGTAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAA    <  2:207593/146‑1                                                                                                                                                       CCGTCA‑‑T‑‑GCG‑CTGCGGCCCCTGGCTGGGGCCTTCGGCGCGGTCCTGCGGGGAGCAAGGCGGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAG   <  5:262860/149‑1                                                                                                                                                       CCGTCA‑‑A‑‑GCG‑GGGCGGCCCCAGTTGGGGGCCTTCGGCGGGGTCCTGCGGGGAGCAAGGCCGGAGTGTGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTT                       <  4:173488/129‑1                                                                                                                                                       CCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAG   >  2:189192/1‑149                                                                                                                                                       CCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTT                       >  3:173488/1‑129                                                                                                                                                       CCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACT                         >  7:285787/1‑127                                                                                                                                                       CCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACT                         <  8:285787/127‑1                                                                                                                                                       CCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGC                                          <  2:78031/110‑1                                                                                                                                                       CCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGG                                                <  5:357168/104‑1                                                                                                                                                       CCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGG                                                >  6:357168/1‑104                                                                                                                                                       CCGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCAGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGC                                          >  1:78031/1‑110                                                                                                                                                        CGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCTGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGT  <  2:44266/149‑1                                                                                                                                                        CGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGT  <  4:243177/149‑1                                                                                                                                                        CGTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGT  >  3:218355/1‑149                                                                                                                                                         GTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGT  >  7:190977/1‑148                                                                                                                                                                                                                                                                                                                   AGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCCTTACGGCGAGT‑CACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2257921‑2258072 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgTCA‑‑A‑‑GCG‑CTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGT  <  NC_002947/2258116‑2257970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.