New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2608453	55 (0.970)	4 (0.070)	3/248	NT	7.2%	coding (164/561 nt)	PP_2285	hypothetical protein
	?	NC_002947	= 2608480	51 (0.940)					coding (191/561 nt)	PP_2285	hypothetical protein

CGTAGCAGCAGCGTGGGCCGCAACGGCCATCGCAGCGGCTGGCACCACCGCGTCCGTGGTCCAGCAGAACCAGCAAGCGAAATCGACCGCAGCATATGAAGAGCAGCAGTCTGAGAACGACTTGAAGGCGTATCAGGACAACCAAGCGCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2608301‑2608453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagacTGGCGGGCCTGCTCGTTCGCATACCCGGTCTGCGCTTGGTTGTCCTGATACGCCTTCAAGTCGTTCTCAGACTGCTGCTCTTCATATGCTGCGGTCGATTTCGCTTGCTGGTTCTGCTGGACCACGGACGCGGTGGTGCCAGCC  <  NC_002947/2608480‑2608337                                                                                                                                                                                                                                                                                                           CGTAGCAGCAGCGTGGGCCGCAACGGCCATCGCAGCGGCTGGCACCACCGCGTCCGTGGTCCAGCAGAACCAGCAAGCGAAATCGACCGCAGCATATGAAGAGCAGCAGTCTGAGAACGACTTGAAGGCGTATCAGGACAACCAAGCG                                                                                                                                                       >  2:10617/1‑148  GTAGCAGCAGCGTGGGCCGCAACGGCCATCGCAGCGGCTGGCACCACCGCGTCCGTGGTCCAGCAGAACCAGCAAGCGAAATCGACCGCAGCATATGAAGAGCAGCAGTCTGAGAACGACTTGAAGGCGTATCAGGACAACCAAGCGC                                                                                                                                                      <  8:99218/148‑1                                      GCTGGCACCACCGCGTCCGTGGTCCAGCAGAACCAGCAAGCGAAATCGACCGCAGCATATGAAGAGCAGCAGTCTGAGAACGACTTGAAGGCGTATCAGGACAACCAAGCGCAGACTGGCGGGCCTGCTCGTTCGCATACCCGGTCTGC                                                                                                                 <  2:7537/149‑1                                       ctatctCCACCGCGTCCGTGGTCCATCAGAACCAGCAAGCGAAATCGACCGCAGCATATGAAGAGCAGCAGTCTGAGAACGACTTGAAGGCGTATCAGGACAACCAAGCGCAGACTGGCGGGCCTGCTCGTTCGCATACCCGGTCTGC                                                                                                                 <  7:293901/142‑1                                        TGGCACCACCGCGTCCGTGGTCCAGCAGAACCAGCAAGCGAAATCGACCGCAGCATATGAAGAGCAGCAGTCTGAGAACGACTTGAAGGCGTATCAGGACAACCAAGCGCAGACTGGCGGGCCTGCTCGTTCGCATACCCGGTCTGCGC                                                                                                               <  2:53469/149‑1                                              CACCGCGTCCGTGGTCCAGCAGAACCAGCAAGCGAAATCGACCGCAGCATATGAAGAGCAGCAGTCTGAGAACGACTTGAAGGCGTATCAGGACAACCAAGCGCAGACTGGCGGGCCTGCTCGTTCGCATACCCGGTCTGC                                                                                                                 >  8:293901/1‑141                                                                                                                                                     CAGACTGGCGGGCCTGCTCGTTCGCATACCCGGTCTGCGCTTGGTTGTCCTGATACGCCTTCAAGTCGTTCTCAGACTGCTGCTCTTCATATGCTGCGGTCGATTTCGCTTGCTGGTTCTGCTGGACCACGGACGCGGTGGTGCCAGCC  >  6:232129/1‑149                                                                                                                                                        ACTGGCGGGCCTGCTCGTTCGCATACCCGGTCTGCGCTTGGTTGTCCTGATACGCCTTCAAGTCGTTCTCAGACTGCTGCTCTTCATATGCTGCGGTCGATTTCGCTTGCTGG                                   >  5:7910/1‑113                                                                                                                                                        ACTGGCGGGCCTGCTCGTTCGCATACCCGGTCTGCGCTTGGTTGTCCTGATACGCCTTCAAGTCGTTCTCAGACTGCTGCTCTTCATATGCTGCGGTCGATTTCGCTTGCTGG                                   <  6:7910/113‑1                                                                                                                                                                                                                                                                                                           CGTAGCAGCAGCGTGGGCCGCAACGGCCATCGCAGCGGCTGGCACCACCGCGTCCGTGGTCCAGCAGAACCAGCAAGCGAAATCGACCGCAGCATATGAAGAGCAGCAGTCTGAGAACGACTTGAAGGCGTATCAGGACAACCAAGCGCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2608301‑2608453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagacTGGCGGGCCTGCTCGTTCGCATACCCGGTCTGCGCTTGGTTGTCCTGATACGCCTTCAAGTCGTTCTCAGACTGCTGCTCTTCATATGCTGCGGTCGATTTCGCTTGCTGGTTCTGCTGGACCACGGACGCGGTGGTGCCAGCC  <  NC_002947/2608480‑2608337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.