| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2658488 = | 66 (1.160) | 6 (0.110) | 6/252 | NT | 9.3% | coding (313/981 nt) | PP_2330 | hypothetical protein |
| ? | NC_002947 | 2658580 = | 53 (0.970) | coding (221/981 nt) | PP_2330 | hypothetical protein | |||||
CATGTGCCGGAAATGTACGGCATCATCGAGACCGAAAAAGAGATCGAGAAGCTCGACCAGATCATCGGCGGTCGCAGCGATTTCGTCATCAAGCCGGCGCAAGGCGCCGGCGGTGACGGCATCCTGGTAATCGCCGACCGCTTCGAGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2658638‑2658488‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcTGGTCGAGCTTCTCGATCTCTTTTTCGGTCTCGATGATGCCGTACATTTCCGGCACATGGATGCCGGCCGCCAGTGCGCGCTCCTTGGTGA > NC_002947/2658580‑2658670 CATGTGCCGGAAATGTACGGCATCATCGAGACCGAAAAAGAGATCGAGAAGCTCGACCAGATCATCGGCGGTCGCAGCGATTTCGTCATCAAGCCGGCGCAAGGCGCCGGCGGTGACGGCATCCTGGTAATCGCCGACCGCTTCGAGGA < 4:266901/149‑1CATGTGCCGGAAATGTACGGCATCATCGAGACCGAAAAAGAGATCGAGAAGCTCGACCAGATCATCGGCGGTCGCAGCGATTTCGTCATCAAGCCGGCGCAAGGCGCCGGCGGTGACGGCATCCTGGTAATCGCCGACCGCTTCGAGGA < 7:332932/149‑1 TCGAGACCGAAAAAGAGATCGAGAAGCTCGACCAGATCATCGGCGGTCGCAGCGATTTCGTCATCAAGCCGGCGCAAGGCGCCGGCGGTGACGGCATCCTGGTAATCGCCGACCGCTTCGAGG > 1:362026/1‑123 GACCAGATCATCGGCGGTCGCAGCGATTTCGTCATCAAGCCGGCGCAAGGCGCCGGCGGTGACGGCATCCTGGTAATCGCCGACCGCTTCGAGGATCTGGTCGAGCTTCTCGATCTCTTTTTCGGTCTCGATGATGCCGTACATTTCC < 1:85506/148‑1 GACCAGATCATCGGCGGTCGCAGCGATTTCGTCATCAAGCCGGCGCAAGGCGCCGGCGGTGACGGCATCCTGGTAATCGCCGACCGCTTCGAGGATCTGGTCGAGCTTCTCGATCTCTTTTTCGGTCTCGATGATGCCGTACATTTCC > 2:85506/1‑148 GATCATCGGCGGTCGCAGCGATTTCGTCATCAAGCCGGCGCAAGGCGCCGGCGGTGACGGCATCCTGGTAATCGCCGACCGCTTCGAGGATCTGGTCGAGCTTCTCGATCTCTTTTTCGGTCTCGATGATGCCGTACATTTCCGGCACA > 2:72591/1‑149 GGTCGCAGCGATTTCGTCATCAAGCCGGCGCAAGGCGCCGGCGGTGACGGCATCCTGGTAATCGCCGACCGCTTCGAGGATCTGGTCGAGCTTCTCGATCTCTTTTTCG > 7:272157/1‑109 GGTCGCAGCGATTTCGTCATCAAGCCGGCGCAAGGCGCCGGCGGTGACGGCATCCTGGTAATCGCCGACCGCTTCGAGGATCTGGTCGAGCTTCTCGATCTCTTTTTCG < 8:272157/109‑1 CCGGCGCAAGGCGCCGGCGGTGACGGCATCCTGGTAATCGCCGACCGCTTCGAGGATCTGGTCGAGCTTCTCGATCTCTTTTTCGGTCTCGATGATGCCGTACATTTCCGGCACATGGATGCCGGCCGCCAGTGCGCGCTCCTTGGTGA < 1:72591/149‑1 CATGTGCCGGAAATGTACGGCATCATCGAGACCGAAAAAGAGATCGAGAAGCTCGACCAGATCATCGGCGGTCGCAGCGATTTCGTCATCAAGCCGGCGCAAGGCGCCGGCGGTGACGGCATCCTGGTAATCGCCGACCGCTTCGAGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2658638‑2658488‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcTGGTCGAGCTTCTCGATCTCTTTTTCGGTCTCGATGATGCCGTACATTTCCGGCACATGGATGCCGGCCGCCAGTGCGCGCTCCTTGGTGA > NC_002947/2658580‑2658670 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |