| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2814594 = | 59 (1.040) | 3 (0.060) | 3/248 | NT | 5.6% | coding (731/2382 nt) | pheT | phenylalanine‑‑tRNA ligase subunit beta |
| ? | NC_002947 | 2814654 = | 44 (0.810) | coding (791/2382 nt) | pheT | phenylalanine‑‑tRNA ligase subunit beta | |||||
CCACTTCCTGGCCGTCGAGCAGGACGAGCTTTTCGCCCTCTTCGGCCATGCGCACGCGGATGCCGCCGTTGATTTCTGCCAGGTCGAAGGCGTGCATCGGCTGGCCGAGTTCGAGCATCACGTAGTTGGTGATGTCGACGGCGGCGTCGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2814746‑2814594‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatgcACGCCTTCGACCTGGCAGAAATCAACGGCGGCATCCGCGTGCGCATGGCCGAAGAGGGCGAAAAGCTCGTCCTGCTCGACGGCCAGGAAGTGGCCCTGCGCGCCGACACCCTGGTCATCGCCGACCACACCCGCGCCTTGGCCATCG > NC_002947/2814654‑2814800 CCACTTCCTGGCCGTCGAGCAGGACGAGCTTTTCGCCCTCTTCGGCCATGCGCACGCGGATGCCGCCGTTGATTTCTGCCAGGTCGAAGGCGTGCATCGGCTGGCCGAGTTCGAGCATCACGTAGTTGGTGATGTCGACGGCGGCGTCG < 3:334591/149‑1CCACTTCCTGGCCGTCGAGCAGGACGAGCTTTTCGCCCTCTTCGGCCATGCGCACGCGGATGCCGCCGTTGATTTCTGCCAGGTCGAAGGCGTGCATCGGCTGGCCGAGTTCGAGCATCACGTAGTTGGTGATGTCGACGGCGGCGTCG < 5:273756/149‑1CCACTTCCTGGCCGTCGAGCAGGACGAGCTTTTCGCCCTCTTCGGCCATGCGCACGCGGATGCCGCCGTTGATTTCTGCCAGGTCGAAGGCGTGCATCGGCTGGCCGAGTTCGAGCATCACGTAGTTGGTGATGTCGACGGCGGCGTC > 1:90465/1‑148 ACTTCCTGGCCGTCGAGCAGGACGAGCTTTTCGCCCTCTTCGGCCATGCGCACGCGGATGCCGCCGTTGATTTCTGCCAGGTCGAAGGCGTGCATCGGCTGGCCGAGTTCGAGCATCACGTAGTTGGTGATGTCGACGGCGGCGTCGAT > 7:196859/1‑149 aaagctCGTCGAGCAGGACGAGCTTTTCGCCCTCTTCGGCCATGCGCACGCGGATGCCGCCGTTGATTTCTGCCAGGTCGAAGGCGTGCATCGGCTGGCCGAGATCGAGCATCACGTAGTTGGTGATGTCGACGGCCGCGTCGATGCAg > 4:290655/7‑148 AGCAGGACGAGCTTTTCGCCCTCTTCGGCCATGCGCACGCGGATGCCGCCGTTGATTTCTGCCAGGTCGAAGGCGTGCATCGGCTGGCCGAGTTCGAGCATCACGTAGTTGGTGATGTCGACGGCGGCGTCGATGC < 1:146958/136‑1 AGCAGGACGAGCTTTTCGCCCTCTTCGGCCATGCGCACGCGGATGCCGCCGTTGATTTCTGCCAGGTCGAAGGCGTGCATCGGCTGGCCGAGTTCGAGCATCACGTAGTTGGTGATGTCGACGGCGGCGTCGATGC > 2:146958/1‑136 GCGTGCATCGGCTGGCCGAGTTCGAGCATCACGTAGTTGGTGATGTCGACGGCGGCGTCGATGCACGCCTTCGACCTGGCAGAAATCAACGGCGGCATCCGCGTGCGCATGGCCGAAGAGGGCGAAAAGCTCGTCCTGCTCGACGGC > 6:258021/1‑147 GTGCATCGGCTGGCCGAGTTCGAGCATCACGTAGTTGGTGATGTCGACGGCGGCGTCGATGCACGCCTTAGACCTGGCAGAAATCAACGGCGGCATCCGCGTGCGCATGGCCGAAGAGGGCGAAAAGCTCGTCCTGCTCGACGGCCAG > 7:206018/1‑148 GTTCGAGCATCACGTAGTTGGTGATGTCGACGGCGGCGTCGATGCACGCCTTCGACCTGGCAGAAATCAACGGCGGCATCCGCGTGCGCATGGCCGAAGAGGGCGAAAAGCTCGTCCTGCTCGACGGCCAGGAAGTGGCCCTGCGCGCC < 5:258021/149‑1 GCACGCCTTCGACCTGGCAGAAATCAACGGCGGCATCCGCGTGCGCATGGCCGAAGAGGGCGAAAAGCTCGTCCTGCTCGACGGCCAGGAAGTGGCCCTGCGCGCCGACACCCTGGTCATCGCCGCCCACACCCGCGCCTTGGCCATCG > 7:166466/1‑149 GCACGCCTTCGACCTGGCAGAAATCAACGGCGGCATCCGCGTGCGCATGGCCGAAGAGGGCGAAAAGCTCGTCCTGCTCGACGGCCAGGAAGTGGCCCTGCGCGCCGACACCCTGGTCATCGCCGACCACACCCGCGCCTTGGCCATCG > 1:269183/1‑149 CCACTTCCTGGCCGTCGAGCAGGACGAGCTTTTCGCCCTCTTCGGCCATGCGCACGCGGATGCCGCCGTTGATTTCTGCCAGGTCGAAGGCGTGCATCGGCTGGCCGAGTTCGAGCATCACGTAGTTGGTGATGTCGACGGCGGCGTCGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2814746‑2814594‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatgcACGCCTTCGACCTGGCAGAAATCAACGGCGGCATCCGCGTGCGCATGGCCGAAGAGGGCGAAAAGCTCGTCCTGCTCGACGGCCAGGAAGTGGCCCTGCGCGCCGACACCCTGGTCATCGCCGACCACACCCGCGCCTTGGCCATCG > NC_002947/2814654‑2814800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |